Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF6Q9Y252 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
RNF6Q9Y252 AC004408.2-201ENST00000623613 2777 ntBASIC18.52■□□□□ 0.55
RNF6Q9Y252 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF6Q9Y252 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF6Q9Y252 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF6Q9Y252 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF6Q9Y252 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
RNF6Q9Y252 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF6Q9Y252 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF6Q9Y252 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF6Q9Y252 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF6Q9Y252 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF6Q9Y252 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF6Q9Y252 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.51■□□□□ 0.55
RNF6Q9Y252 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF6Q9Y252 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF6Q9Y252 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF6Q9Y252 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF6Q9Y252 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF6Q9Y252 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF6Q9Y252 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF6Q9Y252 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF6Q9Y252 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF6Q9Y252 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF6Q9Y252 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF6Q9Y252 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF6Q9Y252 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF6Q9Y252 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RNF6Q9Y252 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF6Q9Y252 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RNF6Q9Y252 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF6Q9Y252 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF6Q9Y252 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF6Q9Y252 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF6Q9Y252 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF6Q9Y252 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.5■□□□□ 0.55
RNF6Q9Y252 GCSHP5-201ENST00000443090 522 ntBASIC18.5■□□□□ 0.55
RNF6Q9Y252 AC128676.1-201ENST00000454392 318 ntBASIC18.5■□□□□ 0.55
RNF6Q9Y252 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF6Q9Y252 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF6Q9Y252 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF6Q9Y252 AP006294.2-201ENST00000641667 209 ntBASIC18.5■□□□□ 0.55
RNF6Q9Y252 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF6Q9Y252 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF6Q9Y252 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF6Q9Y252 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RNF6Q9Y252 AC005332.7-201ENST00000614046 2005 ntBASIC18.5■□□□□ 0.55
RNF6Q9Y252 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
RNF6Q9Y252 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF6Q9Y252 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RNF6Q9Y252 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF6Q9Y252 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF6Q9Y252 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF6Q9Y252 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF6Q9Y252 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF6Q9Y252 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF6Q9Y252 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF6Q9Y252 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RNF6Q9Y252 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF6Q9Y252 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF6Q9Y252 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF6Q9Y252 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RNF6Q9Y252 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RNF6Q9Y252 AL355472.2-201ENST00000422958 438 ntBASIC18.49■□□□□ 0.55
RNF6Q9Y252 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF6Q9Y252 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RNF6Q9Y252 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF6Q9Y252 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.49■□□□□ 0.55
RNF6Q9Y252 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF6Q9Y252 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF6Q9Y252 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF6Q9Y252 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF6Q9Y252 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF6Q9Y252 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF6Q9Y252 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF6Q9Y252 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF6Q9Y252 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF6Q9Y252 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF6Q9Y252 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF6Q9Y252 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.49■□□□□ 0.55
RNF6Q9Y252 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF6Q9Y252 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RNF6Q9Y252 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RNF6Q9Y252 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF6Q9Y252 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
RNF6Q9Y252 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF6Q9Y252 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF6Q9Y252 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF6Q9Y252 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RNF6Q9Y252 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.48■□□□□ 0.55
RNF6Q9Y252 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF6Q9Y252 AL158047.1-201ENST00000445918 881 ntBASIC18.48■□□□□ 0.55
RNF6Q9Y252 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RNF6Q9Y252 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF6Q9Y252 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.48■□□□□ 0.55
RNF6Q9Y252 UNC93B5-201ENST00000530315 699 ntBASIC18.48■□□□□ 0.55
RNF6Q9Y252 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF6Q9Y252 AC142381.4-202ENST00000563973 229 ntBASIC18.48■□□□□ 0.55
RNF6Q9Y252 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms