Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
COMMD9Q9P000 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COMMD9Q9P000 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COMMD9Q9P000 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.77■□□□□ 0.28
COMMD9Q9P000 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COMMD9Q9P000 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.77■□□□□ 0.28
COMMD9Q9P000 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COMMD9Q9P000 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
COMMD9Q9P000 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COMMD9Q9P000 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COMMD9Q9P000 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.77■□□□□ 0.28
COMMD9Q9P000 MIR939-201ENST00000401314 82 ntBASIC16.77■□□□□ 0.28
COMMD9Q9P000 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
COMMD9Q9P000 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.77■□□□□ 0.28
COMMD9Q9P000 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COMMD9Q9P000 AC012414.1-201ENST00000556676 535 ntBASIC16.77■□□□□ 0.28
COMMD9Q9P000 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
COMMD9Q9P000 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.77■□□□□ 0.28
COMMD9Q9P000 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.77■□□□□ 0.28
COMMD9Q9P000 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.77■□□□□ 0.28
COMMD9Q9P000 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COMMD9Q9P000 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
COMMD9Q9P000 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COMMD9Q9P000 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
COMMD9Q9P000 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
COMMD9Q9P000 FER1L4-210ENST00000615531 5998 ntBASIC16.77■□□□□ 0.27
COMMD9Q9P000 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.77■□□□□ 0.27
COMMD9Q9P000 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.77■□□□□ 0.27
COMMD9Q9P000 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
COMMD9Q9P000 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.77■□□□□ 0.27
COMMD9Q9P000 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD9Q9P000 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD9Q9P000 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD9Q9P000 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.76■□□□□ 0.27
COMMD9Q9P000 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.76■□□□□ 0.27
COMMD9Q9P000 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
COMMD9Q9P000 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.76■□□□□ 0.27
COMMD9Q9P000 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.76■□□□□ 0.27
COMMD9Q9P000 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
COMMD9Q9P000 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD9Q9P000 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD9Q9P000 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
COMMD9Q9P000 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.76■□□□□ 0.27
COMMD9Q9P000 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.76■□□□□ 0.27
COMMD9Q9P000 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD9Q9P000 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.76■□□□□ 0.27
COMMD9Q9P000 AF213884.3-201ENST00000563833 479 ntBASIC16.76■□□□□ 0.27
COMMD9Q9P000 AL354811.1-201ENST00000610286 706 ntBASIC16.76■□□□□ 0.27
COMMD9Q9P000 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD9Q9P000 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD9Q9P000 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD9Q9P000 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.76■□□□□ 0.27
COMMD9Q9P000 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.76■□□□□ 0.27
COMMD9Q9P000 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.76■□□□□ 0.27
COMMD9Q9P000 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD9Q9P000 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD9Q9P000 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD9Q9P000 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD9Q9P000 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
COMMD9Q9P000 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.75■□□□□ 0.27
COMMD9Q9P000 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD9Q9P000 AC007613.1-201ENST00000572811 2597 ntBASIC16.75■□□□□ 0.27
COMMD9Q9P000 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD9Q9P000 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD9Q9P000 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.75■□□□□ 0.27
COMMD9Q9P000 POU5F1P4-201ENST00000413175 1085 ntBASIC16.75■□□□□ 0.27
COMMD9Q9P000 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.75■□□□□ 0.27
COMMD9Q9P000 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.75■□□□□ 0.27
COMMD9Q9P000 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.75■□□□□ 0.27
COMMD9Q9P000 AC008175.2-201ENST00000612840 297 ntBASIC16.75■□□□□ 0.27
COMMD9Q9P000 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.75■□□□□ 0.27
COMMD9Q9P000 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD9Q9P000 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD9Q9P000 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
COMMD9Q9P000 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
COMMD9Q9P000 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD9Q9P000 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD9Q9P000 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.75■□□□□ 0.27
COMMD9Q9P000 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD9Q9P000 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
COMMD9Q9P000 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
COMMD9Q9P000 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD9Q9P000 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
COMMD9Q9P000 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD9Q9P000 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.74■□□□□ 0.27
COMMD9Q9P000 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD9Q9P000 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.74■□□□□ 0.27
COMMD9Q9P000 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD9Q9P000 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD9Q9P000 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD9Q9P000 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD9Q9P000 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD9Q9P000 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD9Q9P000 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
COMMD9Q9P000 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
COMMD9Q9P000 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD9Q9P000 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD9Q9P000 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD9Q9P000 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD9Q9P000 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms