Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
THUMPD1Q9NXG2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
THUMPD1Q9NXG2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
THUMPD1Q9NXG2 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
THUMPD1Q9NXG2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.52■□□□□ 0.56
THUMPD1Q9NXG2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
THUMPD1Q9NXG2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.52■□□□□ 0.56
THUMPD1Q9NXG2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
THUMPD1Q9NXG2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
THUMPD1Q9NXG2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.52■□□□□ 0.56
THUMPD1Q9NXG2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
THUMPD1Q9NXG2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
THUMPD1Q9NXG2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
THUMPD1Q9NXG2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
THUMPD1Q9NXG2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.52■□□□□ 0.55
THUMPD1Q9NXG2 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.52■□□□□ 0.55
THUMPD1Q9NXG2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.52■□□□□ 0.55
THUMPD1Q9NXG2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.52■□□□□ 0.55
THUMPD1Q9NXG2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
THUMPD1Q9NXG2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
THUMPD1Q9NXG2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
THUMPD1Q9NXG2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
THUMPD1Q9NXG2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
THUMPD1Q9NXG2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
THUMPD1Q9NXG2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
THUMPD1Q9NXG2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
THUMPD1Q9NXG2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
THUMPD1Q9NXG2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
THUMPD1Q9NXG2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
THUMPD1Q9NXG2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
THUMPD1Q9NXG2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
THUMPD1Q9NXG2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.51■□□□□ 0.55
THUMPD1Q9NXG2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
THUMPD1Q9NXG2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.51■□□□□ 0.55
THUMPD1Q9NXG2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
THUMPD1Q9NXG2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
THUMPD1Q9NXG2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.51■□□□□ 0.55
THUMPD1Q9NXG2 PHGDH-210ENST00000641115 1638 ntBASIC18.51■□□□□ 0.55
THUMPD1Q9NXG2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
THUMPD1Q9NXG2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.51■□□□□ 0.55
THUMPD1Q9NXG2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
THUMPD1Q9NXG2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
THUMPD1Q9NXG2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
THUMPD1Q9NXG2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
THUMPD1Q9NXG2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.51■□□□□ 0.55
THUMPD1Q9NXG2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
THUMPD1Q9NXG2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.5■□□□□ 0.55
THUMPD1Q9NXG2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
THUMPD1Q9NXG2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
THUMPD1Q9NXG2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
THUMPD1Q9NXG2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
THUMPD1Q9NXG2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
THUMPD1Q9NXG2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
THUMPD1Q9NXG2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
THUMPD1Q9NXG2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
THUMPD1Q9NXG2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
THUMPD1Q9NXG2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
THUMPD1Q9NXG2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
THUMPD1Q9NXG2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
THUMPD1Q9NXG2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
THUMPD1Q9NXG2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
THUMPD1Q9NXG2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
THUMPD1Q9NXG2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
THUMPD1Q9NXG2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
THUMPD1Q9NXG2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
THUMPD1Q9NXG2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
THUMPD1Q9NXG2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.5■□□□□ 0.55
THUMPD1Q9NXG2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
THUMPD1Q9NXG2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
THUMPD1Q9NXG2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms