Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 PHGDH-210ENST00000641115 1638 ntBASIC13.57□□□□□ -0.24
CDC42SE2Q9NRR3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 LINC01465-201ENST00000408887 1940 ntBASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 AC093503.3-201ENST00000624917 2352 ntBASIC13.56□□□□□ -0.24
CDC42SE2Q9NRR3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 ZNRF2P3-201ENST00000424200 374 ntBASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 DBI-210ENST00000542275 757 ntTSL 5 BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CDC42SE2Q9NRR3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC13.54□□□□□ -0.24
CDC42SE2Q9NRR3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42SE2Q9NRR3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42SE2Q9NRR3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42SE2Q9NRR3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.54□□□□□ -0.24
CDC42SE2Q9NRR3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42SE2Q9NRR3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42SE2Q9NRR3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CDC42SE2Q9NRR3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42SE2Q9NRR3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42SE2Q9NRR3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42SE2Q9NRR3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CDC42SE2Q9NRR3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC13.54□□□□□ -0.24
CDC42SE2Q9NRR3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.54□□□□□ -0.24
CDC42SE2Q9NRR3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC13.54□□□□□ -0.24
CDC42SE2Q9NRR3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms