Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.96■□□□□ 0.95
TLR9Q9NR96 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.96■□□□□ 0.95
TLR9Q9NR96 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.96■□□□□ 0.95
TLR9Q9NR96 LINC01238-205ENST00000567549 1107 ntBASIC20.96■□□□□ 0.95
TLR9Q9NR96 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.96■□□□□ 0.95
TLR9Q9NR96 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TLR9Q9NR96 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TLR9Q9NR96 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
TLR9Q9NR96 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TLR9Q9NR96 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TLR9Q9NR96 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TLR9Q9NR96 DPP3P2-201ENST00000416030 1696 ntBASIC20.96■□□□□ 0.95
TLR9Q9NR96 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TLR9Q9NR96 PLK5-205ENST00000642079 1969 ntBASIC20.96■□□□□ 0.95
TLR9Q9NR96 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
TLR9Q9NR96 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.95■□□□□ 0.95
TLR9Q9NR96 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TLR9Q9NR96 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TLR9Q9NR96 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TLR9Q9NR96 AC018553.1-201ENST00000616682 1458 ntBASIC20.95■□□□□ 0.94
TLR9Q9NR96 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
TLR9Q9NR96 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TLR9Q9NR96 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TLR9Q9NR96 AC022616.7-201ENST00000525383 220 ntBASIC20.95■□□□□ 0.94
TLR9Q9NR96 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
TLR9Q9NR96 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.95■□□□□ 0.94
TLR9Q9NR96 SLC25A1P4-201ENST00000567977 778 ntBASIC20.95■□□□□ 0.94
TLR9Q9NR96 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TLR9Q9NR96 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TLR9Q9NR96 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TLR9Q9NR96 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.95■□□□□ 0.94
TLR9Q9NR96 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TLR9Q9NR96 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TLR9Q9NR96 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TLR9Q9NR96 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
TLR9Q9NR96 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TLR9Q9NR96 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TLR9Q9NR96 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TLR9Q9NR96 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TLR9Q9NR96 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.94■□□□□ 0.94
TLR9Q9NR96 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.94■□□□□ 0.94
TLR9Q9NR96 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TLR9Q9NR96 INGX-201ENST00000359239 846 ntBASIC20.94■□□□□ 0.94
TLR9Q9NR96 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TLR9Q9NR96 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.94■□□□□ 0.94
TLR9Q9NR96 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.94■□□□□ 0.94
TLR9Q9NR96 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
TLR9Q9NR96 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.94■□□□□ 0.94
TLR9Q9NR96 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.94■□□□□ 0.94
TLR9Q9NR96 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.94■□□□□ 0.94
TLR9Q9NR96 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.94■□□□□ 0.94
TLR9Q9NR96 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TLR9Q9NR96 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TLR9Q9NR96 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TLR9Q9NR96 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
TLR9Q9NR96 AF106564.1-201ENST00000607058 2553 ntBASIC20.93■□□□□ 0.94
TLR9Q9NR96 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.93■□□□□ 0.94
TLR9Q9NR96 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TLR9Q9NR96 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TLR9Q9NR96 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TLR9Q9NR96 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
TLR9Q9NR96 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TLR9Q9NR96 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.93■□□□□ 0.94
TLR9Q9NR96 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.93■□□□□ 0.94
TLR9Q9NR96 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.93■□□□□ 0.94
TLR9Q9NR96 AC063952.2-201ENST00000498792 1227 ntBASIC20.93■□□□□ 0.94
TLR9Q9NR96 AP000692.2-201ENST00000608391 879 ntBASIC20.93■□□□□ 0.94
TLR9Q9NR96 AC130371.2-201ENST00000619443 611 ntBASIC20.93■□□□□ 0.94
TLR9Q9NR96 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TLR9Q9NR96 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TLR9Q9NR96 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TLR9Q9NR96 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TLR9Q9NR96 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TLR9Q9NR96 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TLR9Q9NR96 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.93■□□□□ 0.94
TLR9Q9NR96 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.92■□□□□ 0.94
TLR9Q9NR96 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TLR9Q9NR96 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.92■□□□□ 0.94
TLR9Q9NR96 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TLR9Q9NR96 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.92■□□□□ 0.94
TLR9Q9NR96 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.92■□□□□ 0.94
TLR9Q9NR96 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TLR9Q9NR96 HMGA1P5-201ENST00000412453 271 ntBASIC20.92■□□□□ 0.94
TLR9Q9NR96 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.92■□□□□ 0.94
TLR9Q9NR96 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
TLR9Q9NR96 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.92■□□□□ 0.94
TLR9Q9NR96 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
TLR9Q9NR96 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TLR9Q9NR96 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TLR9Q9NR96 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.92■□□□□ 0.94
TLR9Q9NR96 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TLR9Q9NR96 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.92■□□□□ 0.94
TLR9Q9NR96 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TLR9Q9NR96 FP700111.2-201ENST00000619190 1892 ntBASIC20.92■□□□□ 0.94
TLR9Q9NR96 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TLR9Q9NR96 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.91■□□□□ 0.94
TLR9Q9NR96 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TLR9Q9NR96 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.91■□□□□ 0.94
TLR9Q9NR96 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TLR9Q9NR96 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms