Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.145e-6■■■■□ 21.6
XRN2Q9H0D6 SLC25A51-203ENST00000496760 1871 ntTSL 1 (best)22.11■■□□□ 1.136e-7■■■■□ 21.6
XRN2Q9H0D6 PICK1-214ENST00000484021 2531 ntTSL 222.04■■□□□ 1.126e-7■■■■□ 21.6
XRN2Q9H0D6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.125e-6■■■■□ 21.6
XRN2Q9H0D6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.95■■□□□ 1.16e-7■■■■□ 21.6
XRN2Q9H0D6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.13e-7■■■■□ 21.6
XRN2Q9H0D6 ST3GAL4-220ENST00000534733 545 ntTSL 521.8■■□□□ 1.085e-6■■■■□ 21.6
XRN2Q9H0D6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.8■■□□□ 1.086e-7■■■■□ 21.6
XRN2Q9H0D6 ATP2A2-203ENST00000377685 5702 ntTSL 521.75■■□□□ 1.078e-10■■■■□ 21.6
XRN2Q9H0D6 SHH-202ENST00000430104 677 ntTSL 1 (best)21.72■■□□□ 1.076e-7■■■■□ 21.6
XRN2Q9H0D6 SHH-203ENST00000435425 807 ntTSL 1 (best)21.72■■□□□ 1.076e-7■■■■□ 21.6
XRN2Q9H0D6 SHH-204ENST00000441114 888 ntTSL 1 (best)21.72■■□□□ 1.076e-7■■■■□ 21.6
XRN2Q9H0D6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.078e-10■■■■□ 21.6
XRN2Q9H0D6 CC2D1A-204ENST00000587508 1667 ntTSL 521.68■■□□□ 1.066e-7■■■■□ 21.6
XRN2Q9H0D6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.066e-7■■■■□ 21.6
XRN2Q9H0D6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.046e-7■■■■□ 21.6
XRN2Q9H0D6 SSU72-203ENST00000378725 619 ntTSL 221.53■■□□□ 1.046e-7■■■■□ 21.6
XRN2Q9H0D6 AMDHD2-215ENST00000568263 1482 ntTSL 221.47■■□□□ 1.036e-7■■■■□ 21.6
XRN2Q9H0D6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.016e-7■■■■□ 21.6
XRN2Q9H0D6 MYO15B-228ENST00000584516 5709 ntTSL 1 (best)21.35■■□□□ 1.016e-7■■■■□ 21.6
XRN2Q9H0D6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.14■□□□□ 0.976e-7■■■■□ 21.6
XRN2Q9H0D6 NSUN5P1-202ENST00000421140 1535 ntBASIC21.05■□□□□ 0.966e-7■■■■□ 21.6
XRN2Q9H0D6 AC126755.2-205ENST00000546267 1495 ntTSL 520.89■□□□□ 0.946e-7■■■■□ 21.6
XRN2Q9H0D6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.84■□□□□ 0.931e-11■■■■□ 21.6
XRN2Q9H0D6 LINC00910-205ENST00000592094 1042 ntTSL 1 (best)20.83■□□□□ 0.938e-10■■■■□ 21.6
XRN2Q9H0D6 PPP2R2D-204ENST00000482010 1792 ntTSL 220.74■□□□□ 0.911e-12■■■■□ 21.6
XRN2Q9H0D6 GALE-202ENST00000418277 882 ntTSL 520.57■□□□□ 0.888e-10■■■■□ 21.6
XRN2Q9H0D6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.866e-7■■■■□ 21.6
XRN2Q9H0D6 LRRFIP1-215ENST00000498053 593 ntTSL 320.42■□□□□ 0.866e-7■■■■□ 21.6
XRN2Q9H0D6 TUBB4B-202ENST00000604929 2035 ntTSL 1 (best)20.37■□□□□ 0.859e-7■■■■□ 21.6
XRN2Q9H0D6 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20.34■□□□□ 0.853e-7■■■■□ 21.6
XRN2Q9H0D6 PICK1-203ENST00000424694 954 ntTSL 320.32■□□□□ 0.846e-7■■■■□ 21.6
XRN2Q9H0D6 TNRC6A-209ENST00000562829 277 ntTSL 220.22■□□□□ 0.831e-37■■■■□ 21.6
XRN2Q9H0D6 C15orf39-203ENST00000562637 532 ntAPPRIS ALT2 TSL 220.22■□□□□ 0.836e-7■■■■□ 21.6
XRN2Q9H0D6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.13■□□□□ 0.811e-12■■■■□ 21.6
XRN2Q9H0D6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.03■□□□□ 0.88e-8■■■■□ 21.6
XRN2Q9H0D6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.796e-7■■■■□ 21.6
XRN2Q9H0D6 PLOD1-204ENST00000449038 762 ntTSL 519.95■□□□□ 0.786e-7■■■■□ 21.6
XRN2Q9H0D6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.83■□□□□ 0.761e-6■■■■□ 21.6
XRN2Q9H0D6 CLSTN3-216ENST00000545663 533 ntTSL 419.82■□□□□ 0.766e-7■■■■□ 21.6
XRN2Q9H0D6 LMF1-215ENST00000570014 882 ntTSL 519.8■□□□□ 0.761e-12■■■■□ 21.6
XRN2Q9H0D6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.79■□□□□ 0.766e-7■■■■□ 21.6
XRN2Q9H0D6 SORBS2-210ENST00000419063 835 ntTSL 319.56■□□□□ 0.726e-7■■■■□ 21.6
XRN2Q9H0D6 HDDC2-210ENST00000609574 607 ntTSL 219.52■□□□□ 0.726e-7■■■■□ 21.6
XRN2Q9H0D6 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.52■□□□□ 0.726e-7■■■■□ 21.6
XRN2Q9H0D6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.76e-7■■■■□ 21.6
XRN2Q9H0D6 UTP4-203ENST00000562237 2186 ntTSL 1 (best)19.42■□□□□ 0.76e-7■■■■□ 21.6
XRN2Q9H0D6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.71e-12■■■■□ 21.6
XRN2Q9H0D6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.34■□□□□ 0.696e-7■■■■□ 21.6
XRN2Q9H0D6 AMDHD2-218ENST00000570028 694 ntTSL 219.21■□□□□ 0.676e-7■■■■□ 21.6
XRN2Q9H0D6 GPR108-213ENST00000598626 619 ntTSL 319.1■□□□□ 0.656e-7■■■■□ 21.6
XRN2Q9H0D6 HDDC2-201ENST00000318787 1350 ntTSL 1 (best)19.03■□□□□ 0.646e-7■■■■□ 21.6
XRN2Q9H0D6 CLSTN3-213ENST00000541953 570 ntTSL 519.02■□□□□ 0.646e-7■■■■□ 21.6
XRN2Q9H0D6 C15orf39-204ENST00000563905 581 ntAPPRIS ALT2 TSL 419■□□□□ 0.636e-7■■■■□ 21.6
XRN2Q9H0D6 GALE-207ENST00000459934 1563 ntTSL 519■□□□□ 0.638e-10■■■■□ 21.6
XRN2Q9H0D6 IKBKB-205ENST00000517812 523 ntTSL 318.85■□□□□ 0.616e-7■■■■□ 21.6
XRN2Q9H0D6 LONP1-211ENST00000590558 2884 ntTSL 518.84■□□□□ 0.611e-6■■■■□ 21.6
XRN2Q9H0D6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.75■□□□□ 0.596e-7■■■■□ 21.6
XRN2Q9H0D6 PLOD1-203ENST00000429000 886 ntTSL 518.68■□□□□ 0.586e-7■■■■□ 21.6
XRN2Q9H0D6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.66■□□□□ 0.581e-12■■■■□ 21.6
XRN2Q9H0D6 DDX11-209ENST00000536580 838 ntTSL 518.57■□□□□ 0.566e-7■■■■□ 21.6
XRN2Q9H0D6 CFL1-210ENST00000530945 1509 ntTSL 218.53■□□□□ 0.563e-7■■■■□ 21.6
XRN2Q9H0D6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.46■□□□□ 0.551e-6■■■■□ 21.6
XRN2Q9H0D6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.553e-7■■■■□ 21.6
XRN2Q9H0D6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.548e-10■■■■□ 21.6
XRN2Q9H0D6 GPR108-205ENST00000594500 523 ntTSL 318.44■□□□□ 0.546e-7■■■■□ 21.6
XRN2Q9H0D6 GPR108-203ENST00000537722 619 ntTSL 1 (best)18.44■□□□□ 0.546e-7■■■■□ 21.6
XRN2Q9H0D6 MYO15B-234ENST00000619501 7167 ntTSL 518.44■□□□□ 0.546e-7■■■■□ 21.6
XRN2Q9H0D6 AC009041.2-205ENST00000565467 3726 ntTSL 1 (best)18.41■□□□□ 0.541e-12■■■■□ 21.6
XRN2Q9H0D6 DDX11-218ENST00000542129 1561 ntTSL 218.37■□□□□ 0.536e-7■■■■□ 21.6
XRN2Q9H0D6 PICK1-204ENST00000426258 555 ntTSL 418.29■□□□□ 0.526e-7■■■■□ 21.6
XRN2Q9H0D6 USP11-207ENST00000478596 970 ntTSL 318.2■□□□□ 0.58e-10■■■■□ 21.6
XRN2Q9H0D6 GPR108-208ENST00000595908 1750 ntTSL 518.12■□□□□ 0.496e-7■■■■□ 21.6
XRN2Q9H0D6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.488e-10■■■■□ 21.6
XRN2Q9H0D6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.02■□□□□ 0.488e-10■■■■□ 21.6
XRN2Q9H0D6 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.93■□□□□ 0.468e-8■■■■□ 21.6
XRN2Q9H0D6 GPX4-203ENST00000585480 501 ntTSL 217.93■□□□□ 0.466e-7■■■■□ 21.6
XRN2Q9H0D6 ABCC6-205ENST00000576204 1914 ntTSL 517.92■□□□□ 0.468e-10■■■■□ 21.6
XRN2Q9H0D6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.461e-6■■■■□ 21.6
XRN2Q9H0D6 LRRFIP1-207ENST00000465870 1626 ntTSL 317.91■□□□□ 0.466e-7■■■■□ 21.6
XRN2Q9H0D6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.456e-7■■■■□ 21.6
XRN2Q9H0D6 PARD6G-AS1-203ENST00000587254 584 ntTSL 417.75■□□□□ 0.436e-7■■■■□ 21.6
XRN2Q9H0D6 PARD6G-AS1-201ENST00000585422 525 ntTSL 417.75■□□□□ 0.436e-7■■■■□ 21.6
XRN2Q9H0D6 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.426e-7■■■■□ 21.6
XRN2Q9H0D6 NSUN5P1-201ENST00000393633 4792 ntTSL 217.62■□□□□ 0.416e-7■■■■□ 21.6
XRN2Q9H0D6 EIF4E-202ENST00000418385 574 ntTSL 417.6■□□□□ 0.418e-10■■■■□ 21.6
XRN2Q9H0D6 UBA2-205ENST00000590048 847 ntTSL 317.5■□□□□ 0.396e-7■■■■□ 21.6
XRN2Q9H0D6 PICK1-210ENST00000468288 569 ntTSL 417.4■□□□□ 0.386e-7■■■■□ 21.6
XRN2Q9H0D6 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.37■□□□□ 0.376e-7■■■■□ 21.6
XRN2Q9H0D6 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.33■□□□□ 0.363e-7■■■■□ 21.6
XRN2Q9H0D6 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.12■□□□□ 0.336e-7■■■■□ 21.6
XRN2Q9H0D6 ZMYND11-211ENST00000439456 762 ntTSL 417.09■□□□□ 0.336e-7■■■■□ 21.6
XRN2Q9H0D6 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.08■□□□□ 0.326e-7■■■■□ 21.6
XRN2Q9H0D6 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC17.04■□□□□ 0.326e-7■■■■□ 21.6
XRN2Q9H0D6 IKBKB-211ENST00000519733 527 ntTSL 417.04■□□□□ 0.326e-7■■■■□ 21.6
XRN2Q9H0D6 PLOD1-208ENST00000485046 991 ntTSL 516.99■□□□□ 0.316e-7■■■■□ 21.6
XRN2Q9H0D6 PLOD1-202ENST00000358133 819 ntTSL 316.96■□□□□ 0.316e-7■■■■□ 21.6
XRN2Q9H0D6 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.91■□□□□ 0.36e-7■■■■□ 21.6
XRN2Q9H0D6 SORBS2-247ENST00000470685 1790 ntTSL 516.84■□□□□ 0.296e-7■■■■□ 21.6
XRN2Q9H0D6 PICK1-212ENST00000472724 555 ntTSL 516.82■□□□□ 0.286e-7■■■■□ 21.6
Retrieved 100 of 21,068 protein–RNA pairs in 84.4 ms