Protein–RNA interactions for Protein: Q96S94

CCNL2, Cyclin-L2, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL2Q96S94 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNL2Q96S94 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNL2Q96S94 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.76■□□□□ 0.59
CCNL2Q96S94 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCNL2Q96S94 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.76■□□□□ 0.59
CCNL2Q96S94 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CCNL2Q96S94 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNL2Q96S94 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNL2Q96S94 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.75■□□□□ 0.59
CCNL2Q96S94 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.75■□□□□ 0.59
CCNL2Q96S94 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNL2Q96S94 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.75■□□□□ 0.59
CCNL2Q96S94 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
CCNL2Q96S94 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNL2Q96S94 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNL2Q96S94 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNL2Q96S94 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.75■□□□□ 0.59
CCNL2Q96S94 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCNL2Q96S94 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.75■□□□□ 0.59
CCNL2Q96S94 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.75■□□□□ 0.59
CCNL2Q96S94 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.75■□□□□ 0.59
CCNL2Q96S94 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.75■□□□□ 0.59
CCNL2Q96S94 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.75■□□□□ 0.59
CCNL2Q96S94 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CCNL2Q96S94 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.75■□□□□ 0.59
CCNL2Q96S94 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.75■□□□□ 0.59
CCNL2Q96S94 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCNL2Q96S94 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNL2Q96S94 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.75■□□□□ 0.59
CCNL2Q96S94 AP005212.1-201ENST00000581547 1997 ntBASIC18.75■□□□□ 0.59
CCNL2Q96S94 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.75■□□□□ 0.59
CCNL2Q96S94 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCNL2Q96S94 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNL2Q96S94 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNL2Q96S94 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNL2Q96S94 KRT16P1-201ENST00000399124 1418 ntBASIC18.74■□□□□ 0.59
CCNL2Q96S94 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNL2Q96S94 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNL2Q96S94 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNL2Q96S94 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CCNL2Q96S94 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.74■□□□□ 0.59
CCNL2Q96S94 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNL2Q96S94 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNL2Q96S94 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNL2Q96S94 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.74■□□□□ 0.59
CCNL2Q96S94 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNL2Q96S94 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNL2Q96S94 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNL2Q96S94 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCNL2Q96S94 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.74■□□□□ 0.59
CCNL2Q96S94 NIFKP9-201ENST00000419265 221 ntBASIC18.74■□□□□ 0.59
CCNL2Q96S94 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.74■□□□□ 0.59
CCNL2Q96S94 AC104076.2-201ENST00000448912 469 ntBASIC18.74■□□□□ 0.59
CCNL2Q96S94 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.74■□□□□ 0.59
CCNL2Q96S94 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCNL2Q96S94 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CCNL2Q96S94 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNL2Q96S94 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNL2Q96S94 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNL2Q96S94 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNL2Q96S94 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCNL2Q96S94 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.73■□□□□ 0.59
CCNL2Q96S94 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNL2Q96S94 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNL2Q96S94 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNL2Q96S94 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNL2Q96S94 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNL2Q96S94 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.73■□□□□ 0.59
CCNL2Q96S94 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNL2Q96S94 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCNL2Q96S94 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CCNL2Q96S94 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNL2Q96S94 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNL2Q96S94 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNL2Q96S94 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNL2Q96S94 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNL2Q96S94 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCNL2Q96S94 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNL2Q96S94 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNL2Q96S94 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CCNL2Q96S94 LIN28AP1-201ENST00000429574 405 ntBASIC18.73■□□□□ 0.59
CCNL2Q96S94 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.73■□□□□ 0.59
CCNL2Q96S94 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCNL2Q96S94 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CCNL2Q96S94 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCNL2Q96S94 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCNL2Q96S94 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
CCNL2Q96S94 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCNL2Q96S94 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNL2Q96S94 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.72■□□□□ 0.59
CCNL2Q96S94 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNL2Q96S94 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNL2Q96S94 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNL2Q96S94 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.72■□□□□ 0.59
CCNL2Q96S94 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNL2Q96S94 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.72■□□□□ 0.59
CCNL2Q96S94 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNL2Q96S94 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.72■□□□□ 0.59
CCNL2Q96S94 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNL2Q96S94 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms