Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.97■□□□□ 0.15
RAB40CQ96S21 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB40CQ96S21 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40CQ96S21 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40CQ96S21 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RAB40CQ96S21 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40CQ96S21 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB40CQ96S21 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40CQ96S21 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40CQ96S21 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40CQ96S21 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40CQ96S21 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40CQ96S21 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40CQ96S21 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RAB40CQ96S21 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40CQ96S21 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB40CQ96S21 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB40CQ96S21 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB40CQ96S21 KRT18P20-201ENST00000548986 1279 ntBASIC15.97■□□□□ 0.15
RAB40CQ96S21 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40CQ96S21 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RAB40CQ96S21 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40CQ96S21 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40CQ96S21 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40CQ96S21 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RAB40CQ96S21 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.97■□□□□ 0.15
RAB40CQ96S21 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40CQ96S21 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40CQ96S21 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40CQ96S21 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.97■□□□□ 0.15
RAB40CQ96S21 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RAB40CQ96S21 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40CQ96S21 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40CQ96S21 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40CQ96S21 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40CQ96S21 AC079598.2-202ENST00000546624 1451 ntBASIC15.97■□□□□ 0.15
RAB40CQ96S21 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RAB40CQ96S21 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
RAB40CQ96S21 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40CQ96S21 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40CQ96S21 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40CQ96S21 KRT16P6-202ENST00000425692 1426 ntBASIC15.96■□□□□ 0.15
RAB40CQ96S21 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40CQ96S21 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40CQ96S21 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40CQ96S21 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40CQ96S21 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40CQ96S21 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40CQ96S21 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40CQ96S21 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC15.96■□□□□ 0.15
RAB40CQ96S21 AL356652.1-201ENST00000615962 565 ntBASIC15.96■□□□□ 0.15
RAB40CQ96S21 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB40CQ96S21 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.96■□□□□ 0.15
RAB40CQ96S21 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB40CQ96S21 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40CQ96S21 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
RAB40CQ96S21 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB40CQ96S21 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40CQ96S21 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.96■□□□□ 0.15
RAB40CQ96S21 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40CQ96S21 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40CQ96S21 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40CQ96S21 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40CQ96S21 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RAB40CQ96S21 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
RAB40CQ96S21 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
RAB40CQ96S21 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RAB40CQ96S21 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RAB40CQ96S21 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RAB40CQ96S21 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.96■□□□□ 0.14
RAB40CQ96S21 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.96■□□□□ 0.14
RAB40CQ96S21 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RAB40CQ96S21 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40CQ96S21 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40CQ96S21 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40CQ96S21 RBM17P2-201ENST00000616397 1405 ntBASIC15.95■□□□□ 0.14
RAB40CQ96S21 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB40CQ96S21 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB40CQ96S21 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.95■□□□□ 0.14
RAB40CQ96S21 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40CQ96S21 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.95■□□□□ 0.14
RAB40CQ96S21 RHOF-204ENST00000537265 699 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB40CQ96S21 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC15.95■□□□□ 0.14
RAB40CQ96S21 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC15.95■□□□□ 0.14
RAB40CQ96S21 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.95■□□□□ 0.14
RAB40CQ96S21 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40CQ96S21 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40CQ96S21 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
RAB40CQ96S21 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40CQ96S21 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40CQ96S21 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40CQ96S21 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40CQ96S21 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB40CQ96S21 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40CQ96S21 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40CQ96S21 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40CQ96S21 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40CQ96S21 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB40CQ96S21 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB40CQ96S21 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms