Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CITED4Q96RK1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CITED4Q96RK1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CITED4Q96RK1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CITED4Q96RK1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CITED4Q96RK1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CITED4Q96RK1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.82■□□□□ 0.28
CITED4Q96RK1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
CITED4Q96RK1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.82■□□□□ 0.28
CITED4Q96RK1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CITED4Q96RK1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.82■□□□□ 0.28
CITED4Q96RK1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CITED4Q96RK1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CITED4Q96RK1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CITED4Q96RK1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CITED4Q96RK1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CITED4Q96RK1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.82■□□□□ 0.28
CITED4Q96RK1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CITED4Q96RK1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.82■□□□□ 0.28
CITED4Q96RK1 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CITED4Q96RK1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.82■□□□□ 0.28
CITED4Q96RK1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CITED4Q96RK1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
CITED4Q96RK1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.81■□□□□ 0.28
CITED4Q96RK1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CITED4Q96RK1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CITED4Q96RK1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CITED4Q96RK1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CITED4Q96RK1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CITED4Q96RK1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CITED4Q96RK1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CITED4Q96RK1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CITED4Q96RK1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CITED4Q96RK1 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CITED4Q96RK1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CITED4Q96RK1 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.81■□□□□ 0.28
CITED4Q96RK1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CITED4Q96RK1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CITED4Q96RK1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.81■□□□□ 0.28
CITED4Q96RK1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CITED4Q96RK1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CITED4Q96RK1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CITED4Q96RK1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
CITED4Q96RK1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.81■□□□□ 0.28
CITED4Q96RK1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CITED4Q96RK1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.81■□□□□ 0.28
CITED4Q96RK1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CITED4Q96RK1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CITED4Q96RK1 CA15P2-201ENST00000611168 834 ntBASIC16.81■□□□□ 0.28
CITED4Q96RK1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.81■□□□□ 0.28
CITED4Q96RK1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CITED4Q96RK1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CITED4Q96RK1 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CITED4Q96RK1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CITED4Q96RK1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CITED4Q96RK1 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.81■□□□□ 0.28
CITED4Q96RK1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CITED4Q96RK1 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
CITED4Q96RK1 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CITED4Q96RK1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CITED4Q96RK1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.8■□□□□ 0.28
CITED4Q96RK1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CITED4Q96RK1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CITED4Q96RK1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CITED4Q96RK1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CITED4Q96RK1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.8■□□□□ 0.28
CITED4Q96RK1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.8■□□□□ 0.28
CITED4Q96RK1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CITED4Q96RK1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CITED4Q96RK1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CITED4Q96RK1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.8■□□□□ 0.28
CITED4Q96RK1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.8■□□□□ 0.28
CITED4Q96RK1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CITED4Q96RK1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CITED4Q96RK1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CITED4Q96RK1 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CITED4Q96RK1 AC009102.2-201ENST00000606772 1639 ntBASIC16.8■□□□□ 0.28
CITED4Q96RK1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.8■□□□□ 0.28
CITED4Q96RK1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CITED4Q96RK1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CITED4Q96RK1 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CITED4Q96RK1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CITED4Q96RK1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CITED4Q96RK1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CITED4Q96RK1 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CITED4Q96RK1 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CITED4Q96RK1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.8■□□□□ 0.28
CITED4Q96RK1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CITED4Q96RK1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CITED4Q96RK1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CITED4Q96RK1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CITED4Q96RK1 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CITED4Q96RK1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.79■□□□□ 0.28
CITED4Q96RK1 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CITED4Q96RK1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CITED4Q96RK1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CITED4Q96RK1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CITED4Q96RK1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CITED4Q96RK1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CITED4Q96RK1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms