Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC89Q8N998 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC89Q8N998 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC89Q8N998 AC120498.9-201ENST00000339021 3867 ntBASIC20.42■□□□□ 0.86
CCDC89Q8N998 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CCDC89Q8N998 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC89Q8N998 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC89Q8N998 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC89Q8N998 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC89Q8N998 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC89Q8N998 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CCDC89Q8N998 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC89Q8N998 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC89Q8N998 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC89Q8N998 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC89Q8N998 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC89Q8N998 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC89Q8N998 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC89Q8N998 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC89Q8N998 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC89Q8N998 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC89Q8N998 AL589743.5-201ENST00000616611 1050 ntBASIC20.41■□□□□ 0.86
CCDC89Q8N998 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC89Q8N998 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC89Q8N998 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC89Q8N998 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC89Q8N998 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC89Q8N998 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC89Q8N998 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC89Q8N998 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CCDC89Q8N998 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC89Q8N998 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC89Q8N998 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC89Q8N998 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC89Q8N998 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC89Q8N998 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC89Q8N998 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC89Q8N998 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC89Q8N998 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC89Q8N998 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC89Q8N998 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCDC89Q8N998 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC89Q8N998 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC89Q8N998 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
CCDC89Q8N998 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC89Q8N998 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC89Q8N998 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC89Q8N998 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC89Q8N998 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC89Q8N998 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC89Q8N998 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC89Q8N998 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC89Q8N998 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC89Q8N998 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.4■□□□□ 0.86
CCDC89Q8N998 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC89Q8N998 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC89Q8N998 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC89Q8N998 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CCDC89Q8N998 OR10C1-204ENST00000622521 1039 ntBASIC20.4■□□□□ 0.86
CCDC89Q8N998 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.4■□□□□ 0.86
CCDC89Q8N998 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC89Q8N998 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CCDC89Q8N998 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.39■□□□□ 0.86
CCDC89Q8N998 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
CCDC89Q8N998 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
CCDC89Q8N998 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.39■□□□□ 0.86
CCDC89Q8N998 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC89Q8N998 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
CCDC89Q8N998 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC89Q8N998 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC89Q8N998 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CCDC89Q8N998 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC89Q8N998 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC89Q8N998 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC89Q8N998 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.39■□□□□ 0.85
CCDC89Q8N998 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CCDC89Q8N998 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC89Q8N998 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC89Q8N998 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC89Q8N998 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CCDC89Q8N998 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC89Q8N998 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC89Q8N998 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC89Q8N998 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC89Q8N998 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC89Q8N998 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC89Q8N998 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC89Q8N998 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC89Q8N998 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CCDC89Q8N998 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC89Q8N998 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC89Q8N998 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC89Q8N998 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC89Q8N998 AC010980.2-201ENST00000587099 1412 ntBASIC20.38■□□□□ 0.85
CCDC89Q8N998 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC89Q8N998 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC89Q8N998 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC89Q8N998 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC89Q8N998 AL162430.1-201ENST00000480705 870 ntBASIC20.38■□□□□ 0.85
CCDC89Q8N998 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms