Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 AC233702.5-201ENST00000584107 538 ntBASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARHGEF39Q8N4T4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ARHGEF39Q8N4T4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
ARHGEF39Q8N4T4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ARHGEF39Q8N4T4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
ARHGEF39Q8N4T4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF39Q8N4T4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ARHGEF39Q8N4T4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.64■□□□□ 0.57
ARHGEF39Q8N4T4 TMEM179-206ENST00000616017 1645 ntBASIC18.64■□□□□ 0.57
ARHGEF39Q8N4T4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.64■□□□□ 0.57
ARHGEF39Q8N4T4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ARHGEF39Q8N4T4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF39Q8N4T4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF39Q8N4T4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ARHGEF39Q8N4T4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ARHGEF39Q8N4T4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.64■□□□□ 0.57
ARHGEF39Q8N4T4 AC012618.2-201ENST00000428058 849 ntBASIC18.64■□□□□ 0.57
ARHGEF39Q8N4T4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF39Q8N4T4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.64■□□□□ 0.57
ARHGEF39Q8N4T4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF39Q8N4T4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF39Q8N4T4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF39Q8N4T4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ARHGEF39Q8N4T4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.64■□□□□ 0.57
ARHGEF39Q8N4T4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF39Q8N4T4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF39Q8N4T4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF39Q8N4T4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF39Q8N4T4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ARHGEF39Q8N4T4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARHGEF39Q8N4T4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 RPS2P55-201ENST00000397318 883 ntBASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 AC107956.1-201ENST00000494359 873 ntBASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 AC004264.1-201ENST00000608354 794 ntBASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.63■□□□□ 0.57
ARHGEF39Q8N4T4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ARHGEF39Q8N4T4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.62■□□□□ 0.57
ARHGEF39Q8N4T4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ARHGEF39Q8N4T4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ARHGEF39Q8N4T4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ARHGEF39Q8N4T4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.62■□□□□ 0.57
ARHGEF39Q8N4T4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ARHGEF39Q8N4T4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ARHGEF39Q8N4T4 RPS2P4-201ENST00000476944 856 ntBASIC18.62■□□□□ 0.57
ARHGEF39Q8N4T4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ARHGEF39Q8N4T4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms