Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNPOQ8N3V7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SYNPOQ8N3V7 AC010203.1-204ENST00000548782 407 ntBASIC20.06■□□□□ 0.8
SYNPOQ8N3V7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.06■□□□□ 0.8
SYNPOQ8N3V7 AC087388.1-201ENST00000571370 1112 ntBASIC20.06■□□□□ 0.8
SYNPOQ8N3V7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.06■□□□□ 0.8
SYNPOQ8N3V7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.06■□□□□ 0.8
SYNPOQ8N3V7 AC131212.4-201ENST00000623606 975 ntBASIC20.06■□□□□ 0.8
SYNPOQ8N3V7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.06■□□□□ 0.8
SYNPOQ8N3V7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SYNPOQ8N3V7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNPOQ8N3V7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNPOQ8N3V7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNPOQ8N3V7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SYNPOQ8N3V7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.05■□□□□ 0.8
SYNPOQ8N3V7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNPOQ8N3V7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNPOQ8N3V7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYNPOQ8N3V7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNPOQ8N3V7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.05■□□□□ 0.8
SYNPOQ8N3V7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.05■□□□□ 0.8
SYNPOQ8N3V7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNPOQ8N3V7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SYNPOQ8N3V7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SYNPOQ8N3V7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.05■□□□□ 0.8
SYNPOQ8N3V7 YBX1P10-201ENST00000444752 975 ntBASIC20.05■□□□□ 0.8
SYNPOQ8N3V7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.05■□□□□ 0.8
SYNPOQ8N3V7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SYNPOQ8N3V7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.05■□□□□ 0.8
SYNPOQ8N3V7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYNPOQ8N3V7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.05■□□□□ 0.8
SYNPOQ8N3V7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SYNPOQ8N3V7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SYNPOQ8N3V7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNPOQ8N3V7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNPOQ8N3V7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
SYNPOQ8N3V7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYNPOQ8N3V7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 LINC01238-205ENST00000567549 1107 ntBASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 AC116351.2-201ENST00000606540 1585 ntBASIC20.04■□□□□ 0.8
SYNPOQ8N3V7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNPOQ8N3V7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SYNPOQ8N3V7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.03■□□□□ 0.8
SYNPOQ8N3V7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNPOQ8N3V7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.03■□□□□ 0.8
SYNPOQ8N3V7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNPOQ8N3V7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNPOQ8N3V7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.03■□□□□ 0.8
SYNPOQ8N3V7 BX664615.1-201ENST00000443558 458 ntBASIC20.03■□□□□ 0.8
SYNPOQ8N3V7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.03■□□□□ 0.8
SYNPOQ8N3V7 AC097488.1-201ENST00000507834 756 ntBASIC20.03■□□□□ 0.8
SYNPOQ8N3V7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.03■□□□□ 0.8
SYNPOQ8N3V7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.03■□□□□ 0.8
SYNPOQ8N3V7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SYNPOQ8N3V7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNPOQ8N3V7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.03■□□□□ 0.8
SYNPOQ8N3V7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SYNPOQ8N3V7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNPOQ8N3V7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.03■□□□□ 0.8
SYNPOQ8N3V7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.03■□□□□ 0.8
SYNPOQ8N3V7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.03■□□□□ 0.8
SYNPOQ8N3V7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYNPOQ8N3V7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.02■□□□□ 0.8
SYNPOQ8N3V7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.02■□□□□ 0.8
SYNPOQ8N3V7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.02■□□□□ 0.8
SYNPOQ8N3V7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.02■□□□□ 0.8
SYNPOQ8N3V7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SYNPOQ8N3V7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYNPOQ8N3V7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SYNPOQ8N3V7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYNPOQ8N3V7 AC004980.1-204ENST00000429707 299 ntBASIC20.02■□□□□ 0.8
SYNPOQ8N3V7 TUBB8P6-201ENST00000436895 1288 ntBASIC20.02■□□□□ 0.8
SYNPOQ8N3V7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.02■□□□□ 0.8
SYNPOQ8N3V7 KRT18P16-201ENST00000510337 1294 ntBASIC20.02■□□□□ 0.8
SYNPOQ8N3V7 AC006011.2-201ENST00000621313 1158 ntBASIC20.02■□□□□ 0.8
SYNPOQ8N3V7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms