Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ALYREFQ86V81 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ALYREFQ86V81 UNC93B2-201ENST00000285383 730 ntBASIC20.63■□□□□ 0.89
ALYREFQ86V81 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ALYREFQ86V81 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ALYREFQ86V81 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ALYREFQ86V81 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.63■□□□□ 0.89
ALYREFQ86V81 KRT18P16-201ENST00000510337 1294 ntBASIC20.63■□□□□ 0.89
ALYREFQ86V81 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.63■□□□□ 0.89
ALYREFQ86V81 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ALYREFQ86V81 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.63■□□□□ 0.89
ALYREFQ86V81 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.63■□□□□ 0.89
ALYREFQ86V81 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ALYREFQ86V81 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ALYREFQ86V81 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ALYREFQ86V81 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ALYREFQ86V81 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.63■□□□□ 0.89
ALYREFQ86V81 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ALYREFQ86V81 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ALYREFQ86V81 CYP2D8P-201ENST00000433633 1490 ntBASIC20.62■□□□□ 0.89
ALYREFQ86V81 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.62■□□□□ 0.89
ALYREFQ86V81 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
ALYREFQ86V81 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ALYREFQ86V81 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ALYREFQ86V81 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.62■□□□□ 0.89
ALYREFQ86V81 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
ALYREFQ86V81 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ALYREFQ86V81 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ALYREFQ86V81 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.62■□□□□ 0.89
ALYREFQ86V81 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ALYREFQ86V81 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ALYREFQ86V81 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ALYREFQ86V81 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ALYREFQ86V81 LIN28AP1-201ENST00000429574 405 ntBASIC20.62■□□□□ 0.89
ALYREFQ86V81 AC246785.2-201ENST00000432512 513 ntBASIC20.62■□□□□ 0.89
ALYREFQ86V81 AC010203.1-204ENST00000548782 407 ntBASIC20.62■□□□□ 0.89
ALYREFQ86V81 AC093458.2-201ENST00000623150 629 ntBASIC20.62■□□□□ 0.89
ALYREFQ86V81 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ALYREFQ86V81 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ALYREFQ86V81 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.62■□□□□ 0.89
ALYREFQ86V81 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.62■□□□□ 0.89
ALYREFQ86V81 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ALYREFQ86V81 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALYREFQ86V81 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
ALYREFQ86V81 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ALYREFQ86V81 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALYREFQ86V81 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ALYREFQ86V81 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALYREFQ86V81 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.61■□□□□ 0.89
ALYREFQ86V81 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.61■□□□□ 0.89
ALYREFQ86V81 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ALYREFQ86V81 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALYREFQ86V81 ATP5G1P1-201ENST00000448724 379 ntBASIC20.61■□□□□ 0.89
ALYREFQ86V81 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.61■□□□□ 0.89
ALYREFQ86V81 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALYREFQ86V81 LINC01238-205ENST00000567549 1107 ntBASIC20.61■□□□□ 0.89
ALYREFQ86V81 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ALYREFQ86V81 CLEC4GP1-201ENST00000596555 870 ntBASIC20.61■□□□□ 0.89
ALYREFQ86V81 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ALYREFQ86V81 AP000550.4-202ENST00000639755 178 ntBASIC20.61■□□□□ 0.89
ALYREFQ86V81 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ALYREFQ86V81 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ALYREFQ86V81 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ALYREFQ86V81 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALYREFQ86V81 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
ALYREFQ86V81 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
ALYREFQ86V81 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ALYREFQ86V81 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ALYREFQ86V81 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ALYREFQ86V81 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ALYREFQ86V81 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ALYREFQ86V81 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ALYREFQ86V81 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.6■□□□□ 0.89
ALYREFQ86V81 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ALYREFQ86V81 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.6■□□□□ 0.89
ALYREFQ86V81 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ALYREFQ86V81 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ALYREFQ86V81 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.6■□□□□ 0.89
ALYREFQ86V81 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ALYREFQ86V81 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ALYREFQ86V81 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ALYREFQ86V81 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
ALYREFQ86V81 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.6■□□□□ 0.89
ALYREFQ86V81 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ALYREFQ86V81 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.6■□□□□ 0.89
ALYREFQ86V81 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ALYREFQ86V81 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.6■□□□□ 0.89
ALYREFQ86V81 AC243732.1-201ENST00000612648 864 ntBASIC20.6■□□□□ 0.89
ALYREFQ86V81 AC100791.3-201ENST00000617619 330 ntBASIC20.6■□□□□ 0.89
ALYREFQ86V81 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.6■□□□□ 0.89
ALYREFQ86V81 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ALYREFQ86V81 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ALYREFQ86V81 AC006128.1-201ENST00000624704 1661 ntBASIC20.6■□□□□ 0.89
ALYREFQ86V81 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ALYREFQ86V81 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.6■□□□□ 0.89
ALYREFQ86V81 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ALYREFQ86V81 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ALYREFQ86V81 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALYREFQ86V81 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALYREFQ86V81 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms