Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NHLRC1Q6VVB1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NHLRC1Q6VVB1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.7■□□□□ 0.42
NHLRC1Q6VVB1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.69■□□□□ 0.42
NHLRC1Q6VVB1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.68■□□□□ 0.42
NHLRC1Q6VVB1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
NHLRC1Q6VVB1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.68■□□□□ 0.42
NHLRC1Q6VVB1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NHLRC1Q6VVB1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NHLRC1Q6VVB1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NHLRC1Q6VVB1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NHLRC1Q6VVB1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NHLRC1Q6VVB1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NHLRC1Q6VVB1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.68■□□□□ 0.42
NHLRC1Q6VVB1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.68■□□□□ 0.42
NHLRC1Q6VVB1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.68■□□□□ 0.42
NHLRC1Q6VVB1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.68■□□□□ 0.42
NHLRC1Q6VVB1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NHLRC1Q6VVB1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NHLRC1Q6VVB1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NHLRC1Q6VVB1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
NHLRC1Q6VVB1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NHLRC1Q6VVB1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NHLRC1Q6VVB1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.68■□□□□ 0.42
NHLRC1Q6VVB1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NHLRC1Q6VVB1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.68■□□□□ 0.42
NHLRC1Q6VVB1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NHLRC1Q6VVB1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NHLRC1Q6VVB1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NHLRC1Q6VVB1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 AC060766.5-201ENST00000590539 871 ntBASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NHLRC1Q6VVB1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 PHGDH-210ENST00000641115 1638 ntBASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 PNMA6B-201ENST00000538162 1200 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms