Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VSTM1Q6UX27 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.02■□□□□ 0.96
VSTM1Q6UX27 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.02■□□□□ 0.96
VSTM1Q6UX27 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.02■□□□□ 0.96
VSTM1Q6UX27 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VSTM1Q6UX27 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
VSTM1Q6UX27 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
VSTM1Q6UX27 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.02■□□□□ 0.95
VSTM1Q6UX27 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
VSTM1Q6UX27 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VSTM1Q6UX27 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VSTM1Q6UX27 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.01■□□□□ 0.95
VSTM1Q6UX27 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VSTM1Q6UX27 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.01■□□□□ 0.95
VSTM1Q6UX27 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
VSTM1Q6UX27 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VSTM1Q6UX27 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
VSTM1Q6UX27 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.01■□□□□ 0.95
VSTM1Q6UX27 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.01■□□□□ 0.95
VSTM1Q6UX27 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VSTM1Q6UX27 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VSTM1Q6UX27 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VSTM1Q6UX27 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
VSTM1Q6UX27 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VSTM1Q6UX27 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21■□□□□ 0.95
VSTM1Q6UX27 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
VSTM1Q6UX27 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VSTM1Q6UX27 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VSTM1Q6UX27 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VSTM1Q6UX27 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VSTM1Q6UX27 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21■□□□□ 0.95
VSTM1Q6UX27 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21■□□□□ 0.95
VSTM1Q6UX27 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21■□□□□ 0.95
VSTM1Q6UX27 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21■□□□□ 0.95
VSTM1Q6UX27 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21■□□□□ 0.95
VSTM1Q6UX27 PNN-205ENST00000556530 601 ntTSL 2 BASIC21■□□□□ 0.95
VSTM1Q6UX27 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21■□□□□ 0.95
VSTM1Q6UX27 Six3os1_6.1-201ENST00000620790 196 ntBASIC21■□□□□ 0.95
VSTM1Q6UX27 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21■□□□□ 0.95
VSTM1Q6UX27 AC112907.3-201ENST00000577781 2400 ntBASIC21■□□□□ 0.95
VSTM1Q6UX27 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
VSTM1Q6UX27 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VSTM1Q6UX27 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VSTM1Q6UX27 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21■□□□□ 0.95
VSTM1Q6UX27 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21■□□□□ 0.95
VSTM1Q6UX27 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VSTM1Q6UX27 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21■□□□□ 0.95
VSTM1Q6UX27 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
VSTM1Q6UX27 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VSTM1Q6UX27 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VSTM1Q6UX27 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VSTM1Q6UX27 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
VSTM1Q6UX27 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VSTM1Q6UX27 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.99■□□□□ 0.95
VSTM1Q6UX27 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
VSTM1Q6UX27 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.99■□□□□ 0.95
VSTM1Q6UX27 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
VSTM1Q6UX27 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VSTM1Q6UX27 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VSTM1Q6UX27 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
VSTM1Q6UX27 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VSTM1Q6UX27 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.99■□□□□ 0.95
VSTM1Q6UX27 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VSTM1Q6UX27 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VSTM1Q6UX27 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VSTM1Q6UX27 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VSTM1Q6UX27 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.99■□□□□ 0.95
VSTM1Q6UX27 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VSTM1Q6UX27 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VSTM1Q6UX27 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.99■□□□□ 0.95
VSTM1Q6UX27 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.98■□□□□ 0.95
VSTM1Q6UX27 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
VSTM1Q6UX27 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VSTM1Q6UX27 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VSTM1Q6UX27 AL162377.1-201ENST00000618844 1793 ntBASIC20.98■□□□□ 0.95
VSTM1Q6UX27 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
VSTM1Q6UX27 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VSTM1Q6UX27 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.98■□□□□ 0.95
VSTM1Q6UX27 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VSTM1Q6UX27 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.98■□□□□ 0.95
VSTM1Q6UX27 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.98■□□□□ 0.95
VSTM1Q6UX27 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.98■□□□□ 0.95
VSTM1Q6UX27 NBPF21P-201ENST00000425093 1451 ntBASIC20.98■□□□□ 0.95
VSTM1Q6UX27 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VSTM1Q6UX27 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VSTM1Q6UX27 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.98■□□□□ 0.95
VSTM1Q6UX27 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.98■□□□□ 0.95
VSTM1Q6UX27 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.97■□□□□ 0.95
VSTM1Q6UX27 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VSTM1Q6UX27 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.97■□□□□ 0.95
VSTM1Q6UX27 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.97■□□□□ 0.95
VSTM1Q6UX27 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VSTM1Q6UX27 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.97■□□□□ 0.95
VSTM1Q6UX27 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VSTM1Q6UX27 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VSTM1Q6UX27 AC012618.2-201ENST00000428058 849 ntBASIC20.97■□□□□ 0.95
VSTM1Q6UX27 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.97■□□□□ 0.95
VSTM1Q6UX27 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.97■□□□□ 0.95
VSTM1Q6UX27 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.97■□□□□ 0.95
VSTM1Q6UX27 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms