Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM35AQ53FP2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM35AQ53FP2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM35AQ53FP2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 AC125437.2-201ENST00000625180 2167 ntBASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 AC026366.1-201ENST00000488803 879 ntBASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.75■□□□□ 0.59
TMEM35AQ53FP2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 AC008403.3-201ENST00000598924 454 ntBASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TMEM35AQ53FP2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM35AQ53FP2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM35AQ53FP2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM35AQ53FP2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM35AQ53FP2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TMEM35AQ53FP2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.73■□□□□ 0.59
TMEM35AQ53FP2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.73■□□□□ 0.59
TMEM35AQ53FP2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.73■□□□□ 0.59
TMEM35AQ53FP2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
TMEM35AQ53FP2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.73■□□□□ 0.59
TMEM35AQ53FP2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.73■□□□□ 0.59
TMEM35AQ53FP2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.73■□□□□ 0.59
TMEM35AQ53FP2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
TMEM35AQ53FP2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.73■□□□□ 0.59
TMEM35AQ53FP2 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.73■□□□□ 0.59
TMEM35AQ53FP2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM35AQ53FP2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM35AQ53FP2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM35AQ53FP2 AP006587.1-201ENST00000534129 1502 ntBASIC18.73■□□□□ 0.59
TMEM35AQ53FP2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM35AQ53FP2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM35AQ53FP2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM35AQ53FP2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TMEM35AQ53FP2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM35AQ53FP2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.72■□□□□ 0.59
TMEM35AQ53FP2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM35AQ53FP2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM35AQ53FP2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM35AQ53FP2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM35AQ53FP2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.72■□□□□ 0.59
TMEM35AQ53FP2 KRT17P3-201ENST00000420566 1262 ntBASIC18.72■□□□□ 0.59
TMEM35AQ53FP2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms