Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
PAX9P55771 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PAX9P55771 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PAX9P55771 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PAX9P55771 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PAX9P55771 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PAX9P55771 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.82■□□□□ 0.12
PAX9P55771 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PAX9P55771 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC15.82■□□□□ 0.12
PAX9P55771 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15.82■□□□□ 0.12
PAX9P55771 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
PAX9P55771 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PAX9P55771 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PAX9P55771 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PAX9P55771 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PAX9P55771 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PAX9P55771 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PAX9P55771 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PAX9P55771 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PAX9P55771 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PAX9P55771 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.82■□□□□ 0.12
PAX9P55771 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PAX9P55771 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PAX9P55771 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PAX9P55771 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PAX9P55771 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.82■□□□□ 0.12
PAX9P55771 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PAX9P55771 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PAX9P55771 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PAX9P55771 AC006333.2-201ENST00000607957 2099 ntBASIC15.82■□□□□ 0.12
PAX9P55771 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PAX9P55771 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PAX9P55771 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.81■□□□□ 0.12
PAX9P55771 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PAX9P55771 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PAX9P55771 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PAX9P55771 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC15.81■□□□□ 0.12
PAX9P55771 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PAX9P55771 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PAX9P55771 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC15.81■□□□□ 0.12
PAX9P55771 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PAX9P55771 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PAX9P55771 NME4-202ENST00000382940 766 ntTSL 3 BASIC15.81■□□□□ 0.12
PAX9P55771 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PAX9P55771 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PAX9P55771 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC15.81■□□□□ 0.12
PAX9P55771 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.81■□□□□ 0.12
PAX9P55771 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PAX9P55771 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
PAX9P55771 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.81■□□□□ 0.12
PAX9P55771 AC005837.3-201ENST00000612163 286 ntBASIC15.81■□□□□ 0.12
PAX9P55771 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PAX9P55771 NME4-211ENST00000620944 1193 ntTSL 2 BASIC15.81■□□□□ 0.12
PAX9P55771 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PAX9P55771 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PAX9P55771 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
PAX9P55771 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PAX9P55771 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.8■□□□□ 0.12
PAX9P55771 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PAX9P55771 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PAX9P55771 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PAX9P55771 CYP21A1P-202ENST00000354927 1481 ntBASIC15.8■□□□□ 0.12
PAX9P55771 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PAX9P55771 AC005332.8-201ENST00000622750 2735 ntBASIC15.8■□□□□ 0.12
PAX9P55771 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PAX9P55771 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PAX9P55771 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.8■□□□□ 0.12
PAX9P55771 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PAX9P55771 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PAX9P55771 RHOF-204ENST00000537265 699 ntTSL 2 BASIC15.8■□□□□ 0.12
PAX9P55771 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
PAX9P55771 AL031963.3-201ENST00000606441 850 ntBASIC15.8■□□□□ 0.12
PAX9P55771 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PAX9P55771 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PAX9P55771 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PAX9P55771 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.8■□□□□ 0.12
PAX9P55771 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PAX9P55771 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PAX9P55771 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PAX9P55771 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.79■□□□□ 0.12
PAX9P55771 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PAX9P55771 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PAX9P55771 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PAX9P55771 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PAX9P55771 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.79■□□□□ 0.12
PAX9P55771 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.79■□□□□ 0.12
PAX9P55771 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.79■□□□□ 0.12
PAX9P55771 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PAX9P55771 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.79■□□□□ 0.12
PAX9P55771 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PAX9P55771 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PAX9P55771 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.79■□□□□ 0.12
PAX9P55771 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC15.79■□□□□ 0.12
PAX9P55771 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PAX9P55771 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PAX9P55771 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.79■□□□□ 0.12
PAX9P55771 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PAX9P55771 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC15.79■□□□□ 0.12
PAX9P55771 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.79■□□□□ 0.12
PAX9P55771 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms