Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RPL3P39023 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.7■□□□□ 0.58
RPL3P39023 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.7■□□□□ 0.58
RPL3P39023 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
RPL3P39023 MIR663A-201ENST00000385250 93 ntBASIC18.7■□□□□ 0.58
RPL3P39023 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPL3P39023 AC073210.2-201ENST00000430369 194 ntBASIC18.7■□□□□ 0.58
RPL3P39023 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.7■□□□□ 0.58
RPL3P39023 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.7■□□□□ 0.58
RPL3P39023 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.7■□□□□ 0.58
RPL3P39023 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.7■□□□□ 0.58
RPL3P39023 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RPL3P39023 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.7■□□□□ 0.58
RPL3P39023 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.7■□□□□ 0.58
RPL3P39023 BX323043.1-201ENST00000641006 1765 ntBASIC18.7■□□□□ 0.58
RPL3P39023 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.7■□□□□ 0.58
RPL3P39023 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.7■□□□□ 0.58
RPL3P39023 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPL3P39023 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RPL3P39023 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RPL3P39023 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RPL3P39023 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPL3P39023 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPL3P39023 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPL3P39023 AC005332.7-201ENST00000614046 2005 ntBASIC18.69■□□□□ 0.58
RPL3P39023 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RPL3P39023 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPL3P39023 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPL3P39023 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.69■□□□□ 0.58
RPL3P39023 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPL3P39023 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.69■□□□□ 0.58
RPL3P39023 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.69■□□□□ 0.58
RPL3P39023 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.69■□□□□ 0.58
RPL3P39023 AL050303.2-201ENST00000619798 666 ntBASIC18.69■□□□□ 0.58
RPL3P39023 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPL3P39023 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.69■□□□□ 0.58
RPL3P39023 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPL3P39023 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.69■□□□□ 0.58
RPL3P39023 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPL3P39023 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPL3P39023 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPL3P39023 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RPL3P39023 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPL3P39023 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPL3P39023 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPL3P39023 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.68■□□□□ 0.58
RPL3P39023 AC116351.2-201ENST00000606540 1585 ntBASIC18.68■□□□□ 0.58
RPL3P39023 AC093484.2-201ENST00000580996 2166 ntBASIC18.68■□□□□ 0.58
RPL3P39023 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPL3P39023 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.68■□□□□ 0.58
RPL3P39023 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.68■□□□□ 0.58
RPL3P39023 IKBKGP1-201ENST00000612193 1073 ntBASIC18.68■□□□□ 0.58
RPL3P39023 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPL3P39023 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
RPL3P39023 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.68■□□□□ 0.58
RPL3P39023 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPL3P39023 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPL3P39023 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPL3P39023 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.68■□□□□ 0.58
RPL3P39023 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.68■□□□□ 0.58
RPL3P39023 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPL3P39023 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPL3P39023 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RPL3P39023 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPL3P39023 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPL3P39023 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPL3P39023 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPL3P39023 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPL3P39023 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.67■□□□□ 0.58
RPL3P39023 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RPL3P39023 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPL3P39023 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.67■□□□□ 0.58
RPL3P39023 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPL3P39023 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPL3P39023 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPL3P39023 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RPL3P39023 AC018553.1-201ENST00000616682 1458 ntBASIC18.67■□□□□ 0.58
RPL3P39023 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.67■□□□□ 0.58
RPL3P39023 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.67■□□□□ 0.58
RPL3P39023 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPL3P39023 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.67■□□□□ 0.58
RPL3P39023 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPL3P39023 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.67■□□□□ 0.58
RPL3P39023 AL121832.2-201ENST00000610979 668 ntBASIC18.67■□□□□ 0.58
RPL3P39023 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPL3P39023 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPL3P39023 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RPL3P39023 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPL3P39023 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.67■□□□□ 0.58
RPL3P39023 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPL3P39023 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.67■□□□□ 0.58
RPL3P39023 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPL3P39023 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.66■□□□□ 0.58
RPL3P39023 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
RPL3P39023 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPL3P39023 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPL3P39023 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.66■□□□□ 0.58
RPL3P39023 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPL3P39023 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPL3P39023 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms