Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.69■□□□□ 0.74
HOXD12P35452 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.69■□□□□ 0.74
HOXD12P35452 C2orf69P3-201ENST00000565542 1120 ntBASIC19.69■□□□□ 0.74
HOXD12P35452 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXD12P35452 DGCR10-201ENST00000609839 495 ntBASIC19.69■□□□□ 0.74
HOXD12P35452 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXD12P35452 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXD12P35452 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXD12P35452 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
HOXD12P35452 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXD12P35452 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.69■□□□□ 0.74
HOXD12P35452 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD12P35452 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXD12P35452 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD12P35452 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD12P35452 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD12P35452 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD12P35452 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD12P35452 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD12P35452 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD12P35452 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXD12P35452 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.68■□□□□ 0.74
HOXD12P35452 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.68■□□□□ 0.74
HOXD12P35452 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HOXD12P35452 AP005242.2-201ENST00000580065 1175 ntBASIC19.68■□□□□ 0.74
HOXD12P35452 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXD12P35452 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXD12P35452 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HOXD12P35452 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD12P35452 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD12P35452 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HOXD12P35452 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD12P35452 KRT8P20-201ENST00000423953 1409 ntBASIC19.68■□□□□ 0.74
HOXD12P35452 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
HOXD12P35452 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HOXD12P35452 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXD12P35452 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD12P35452 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD12P35452 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD12P35452 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HOXD12P35452 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD12P35452 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD12P35452 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD12P35452 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD12P35452 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD12P35452 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HOXD12P35452 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.67■□□□□ 0.74
HOXD12P35452 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXD12P35452 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXD12P35452 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HOXD12P35452 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HOXD12P35452 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXD12P35452 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD12P35452 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD12P35452 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXD12P35452 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD12P35452 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD12P35452 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD12P35452 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD12P35452 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXD12P35452 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HOXD12P35452 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD12P35452 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD12P35452 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD12P35452 LIN28AP1-201ENST00000429574 405 ntBASIC19.66■□□□□ 0.74
HOXD12P35452 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.66■□□□□ 0.74
HOXD12P35452 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXD12P35452 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.66■□□□□ 0.74
HOXD12P35452 NTF6B-201ENST00000591913 560 ntBASIC19.66■□□□□ 0.74
HOXD12P35452 AL445675.2-201ENST00000620291 557 ntBASIC19.66■□□□□ 0.74
HOXD12P35452 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD12P35452 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD12P35452 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXD12P35452 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD12P35452 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD12P35452 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD12P35452 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXD12P35452 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD12P35452 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HOXD12P35452 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
HOXD12P35452 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HOXD12P35452 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD12P35452 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD12P35452 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
HOXD12P35452 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD12P35452 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD12P35452 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD12P35452 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
HOXD12P35452 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXD12P35452 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXD12P35452 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.65■□□□□ 0.74
HOXD12P35452 EGLN1P1-201ENST00000531623 762 ntBASIC19.65■□□□□ 0.74
HOXD12P35452 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXD12P35452 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXD12P35452 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.65■□□□□ 0.74
HOXD12P35452 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
HOXD12P35452 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXD12P35452 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXD12P35452 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD12P35452 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms