Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.69■□□□□ 0.58
SCN2BO60939 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.69■□□□□ 0.58
SCN2BO60939 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN2BO60939 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN2BO60939 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCN2BO60939 AC092437.1-201ENST00000624794 1048 ntBASIC18.69■□□□□ 0.58
SCN2BO60939 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCN2BO60939 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.69■□□□□ 0.58
SCN2BO60939 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCN2BO60939 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCN2BO60939 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.69■□□□□ 0.58
SCN2BO60939 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SCN2BO60939 AP000974.1-201ENST00000623909 2387 ntBASIC18.69■□□□□ 0.58
SCN2BO60939 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SCN2BO60939 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
SCN2BO60939 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN2BO60939 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCN2BO60939 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCN2BO60939 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN2BO60939 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN2BO60939 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN2BO60939 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN2BO60939 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SCN2BO60939 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SCN2BO60939 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SCN2BO60939 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SCN2BO60939 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SCN2BO60939 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN2BO60939 AC133552.2-202ENST00000575694 574 ntBASIC18.68■□□□□ 0.58
SCN2BO60939 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SCN2BO60939 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN2BO60939 AC005181.1-201ENST00000604782 1256 ntBASIC18.68■□□□□ 0.58
SCN2BO60939 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SCN2BO60939 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.68■□□□□ 0.58
SCN2BO60939 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.68■□□□□ 0.58
SCN2BO60939 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.68■□□□□ 0.58
SCN2BO60939 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN2BO60939 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN2BO60939 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN2BO60939 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SCN2BO60939 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCN2BO60939 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCN2BO60939 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCN2BO60939 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SCN2BO60939 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCN2BO60939 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCN2BO60939 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCN2BO60939 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SCN2BO60939 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCN2BO60939 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCN2BO60939 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCN2BO60939 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCN2BO60939 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.67■□□□□ 0.58
SCN2BO60939 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
SCN2BO60939 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCN2BO60939 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCN2BO60939 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCN2BO60939 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCN2BO60939 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCN2BO60939 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCN2BO60939 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.67■□□□□ 0.58
SCN2BO60939 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.67■□□□□ 0.58
SCN2BO60939 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCN2BO60939 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.66■□□□□ 0.58
SCN2BO60939 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN2BO60939 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN2BO60939 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN2BO60939 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN2BO60939 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.66■□□□□ 0.58
SCN2BO60939 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.66■□□□□ 0.58
SCN2BO60939 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SCN2BO60939 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCN2BO60939 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCN2BO60939 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.66■□□□□ 0.58
SCN2BO60939 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.66■□□□□ 0.58
SCN2BO60939 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SCN2BO60939 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN2BO60939 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCN2BO60939 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.66■□□□□ 0.58
SCN2BO60939 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.66■□□□□ 0.58
SCN2BO60939 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.66■□□□□ 0.58
SCN2BO60939 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.66■□□□□ 0.58
SCN2BO60939 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.66■□□□□ 0.58
SCN2BO60939 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
SCN2BO60939 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCN2BO60939 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SCN2BO60939 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.66■□□□□ 0.58
SCN2BO60939 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SCN2BO60939 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN2BO60939 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN2BO60939 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN2BO60939 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN2BO60939 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCN2BO60939 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN2BO60939 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCN2BO60939 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCN2BO60939 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.65■□□□□ 0.58
SCN2BO60939 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.65■□□□□ 0.58
SCN2BO60939 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN2BO60939 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms