Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TSPAN4O14817 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TSPAN4O14817 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
TSPAN4O14817 RASA4CP-201ENST00000424092 1398 ntBASIC16.51■□□□□ 0.23
TSPAN4O14817 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TSPAN4O14817 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TSPAN4O14817 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TSPAN4O14817 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TSPAN4O14817 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TSPAN4O14817 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TSPAN4O14817 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TSPAN4O14817 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TSPAN4O14817 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TSPAN4O14817 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TSPAN4O14817 AP005435.1-201ENST00000529293 1178 ntBASIC16.5■□□□□ 0.23
TSPAN4O14817 AC010525.1-201ENST00000585559 441 ntBASIC16.5■□□□□ 0.23
TSPAN4O14817 AL136967.2-201ENST00000623968 743 ntBASIC16.5■□□□□ 0.23
TSPAN4O14817 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TSPAN4O14817 AL031602.1-201ENST00000633169 911 ntBASIC16.5■□□□□ 0.23
TSPAN4O14817 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TSPAN4O14817 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.5■□□□□ 0.23
TSPAN4O14817 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.5■□□□□ 0.23
TSPAN4O14817 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TSPAN4O14817 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TSPAN4O14817 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TSPAN4O14817 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TSPAN4O14817 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
TSPAN4O14817 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TSPAN4O14817 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TSPAN4O14817 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.5■□□□□ 0.23
TSPAN4O14817 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TSPAN4O14817 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSPAN4O14817 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSPAN4O14817 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSPAN4O14817 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSPAN4O14817 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.49■□□□□ 0.23
TSPAN4O14817 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.49■□□□□ 0.23
TSPAN4O14817 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TSPAN4O14817 AC020907.5-201ENST00000624372 1936 ntBASIC16.49■□□□□ 0.23
TSPAN4O14817 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TSPAN4O14817 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSPAN4O14817 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TSPAN4O14817 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSPAN4O14817 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TSPAN4O14817 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSPAN4O14817 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.49■□□□□ 0.23
TSPAN4O14817 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TSPAN4O14817 AC099791.1-201ENST00000416440 715 ntBASIC16.49■□□□□ 0.23
TSPAN4O14817 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TSPAN4O14817 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.49■□□□□ 0.23
TSPAN4O14817 AC126544.1-201ENST00000580842 1059 ntBASIC16.49■□□□□ 0.23
TSPAN4O14817 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TSPAN4O14817 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
TSPAN4O14817 AC087239.1-201ENST00000622671 572 ntBASIC16.49■□□□□ 0.23
TSPAN4O14817 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSPAN4O14817 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSPAN4O14817 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TSPAN4O14817 AC006128.1-201ENST00000624704 1661 ntBASIC16.49■□□□□ 0.23
TSPAN4O14817 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TSPAN4O14817 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSPAN4O14817 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TSPAN4O14817 AC099778.1-201ENST00000568593 1911 ntBASIC16.49■□□□□ 0.23
TSPAN4O14817 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSPAN4O14817 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TSPAN4O14817 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
TSPAN4O14817 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TSPAN4O14817 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.48■□□□□ 0.23
TSPAN4O14817 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSPAN4O14817 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSPAN4O14817 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TSPAN4O14817 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TSPAN4O14817 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSPAN4O14817 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
TSPAN4O14817 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSPAN4O14817 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSPAN4O14817 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.48■□□□□ 0.23
TSPAN4O14817 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSPAN4O14817 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TSPAN4O14817 AC124067.4-201ENST00000519691 2379 ntBASIC16.48■□□□□ 0.23
TSPAN4O14817 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSPAN4O14817 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
TSPAN4O14817 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSPAN4O14817 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSPAN4O14817 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.48■□□□□ 0.23
TSPAN4O14817 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.48■□□□□ 0.23
TSPAN4O14817 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.48■□□□□ 0.23
TSPAN4O14817 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSPAN4O14817 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
TSPAN4O14817 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSPAN4O14817 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TSPAN4O14817 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.48■□□□□ 0.23
TSPAN4O14817 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
TSPAN4O14817 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.48■□□□□ 0.23
TSPAN4O14817 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.48■□□□□ 0.23
TSPAN4O14817 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSPAN4O14817 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSPAN4O14817 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TSPAN4O14817 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TSPAN4O14817 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSPAN4O14817 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms