Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
SDHDO14521 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SDHDO14521 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SDHDO14521 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.04■□□□□ 0.64
SDHDO14521 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SDHDO14521 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.04■□□□□ 0.64
SDHDO14521 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.04■□□□□ 0.64
SDHDO14521 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SDHDO14521 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SDHDO14521 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.04■□□□□ 0.64
SDHDO14521 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SDHDO14521 HLA-G-202ENST00000376815 851 ntBASIC19.04■□□□□ 0.64
SDHDO14521 HLA-G-203ENST00000376818 1127 ntBASIC19.04■□□□□ 0.64
SDHDO14521 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.04■□□□□ 0.64
SDHDO14521 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.04■□□□□ 0.64
SDHDO14521 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SDHDO14521 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SDHDO14521 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
SDHDO14521 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.04■□□□□ 0.64
SDHDO14521 NTF6G-201ENST00000591094 616 ntBASIC19.04■□□□□ 0.64
SDHDO14521 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.04■□□□□ 0.64
SDHDO14521 AL138781.2-201ENST00000617896 1843 ntBASIC19.04■□□□□ 0.64
SDHDO14521 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SDHDO14521 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SDHDO14521 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SDHDO14521 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SDHDO14521 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SDHDO14521 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SDHDO14521 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SDHDO14521 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.03■□□□□ 0.64
SDHDO14521 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SDHDO14521 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SDHDO14521 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SDHDO14521 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.03■□□□□ 0.64
SDHDO14521 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SDHDO14521 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SDHDO14521 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SDHDO14521 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SDHDO14521 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.03■□□□□ 0.64
SDHDO14521 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.03■□□□□ 0.64
SDHDO14521 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.03■□□□□ 0.64
SDHDO14521 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
SDHDO14521 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SDHDO14521 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.03■□□□□ 0.64
SDHDO14521 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.03■□□□□ 0.64
SDHDO14521 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.03■□□□□ 0.64
SDHDO14521 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.03■□□□□ 0.64
SDHDO14521 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SDHDO14521 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SDHDO14521 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SDHDO14521 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SDHDO14521 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SDHDO14521 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SDHDO14521 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.02■□□□□ 0.64
SDHDO14521 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.02■□□□□ 0.64
SDHDO14521 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SDHDO14521 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SDHDO14521 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
SDHDO14521 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.02■□□□□ 0.64
SDHDO14521 CNN2P6-201ENST00000439038 900 ntBASIC19.02■□□□□ 0.64
SDHDO14521 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.02■□□□□ 0.64
SDHDO14521 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.02■□□□□ 0.64
SDHDO14521 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
SDHDO14521 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SDHDO14521 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.02■□□□□ 0.63
SDHDO14521 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SDHDO14521 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHDO14521 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SDHDO14521 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHDO14521 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SDHDO14521 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHDO14521 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHDO14521 AC068338.2-201ENST00000563278 1430 ntBASIC19.01■□□□□ 0.63
SDHDO14521 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHDO14521 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHDO14521 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.01■□□□□ 0.63
SDHDO14521 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SDHDO14521 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.01■□□□□ 0.63
SDHDO14521 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.01■□□□□ 0.63
SDHDO14521 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
SDHDO14521 CROCCP3-202ENST00000420820 1947 ntBASIC19.01■□□□□ 0.63
SDHDO14521 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SDHDO14521 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.01■□□□□ 0.63
SDHDO14521 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SDHDO14521 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.01■□□□□ 0.63
SDHDO14521 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SDHDO14521 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19■□□□□ 0.63
SDHDO14521 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
SDHDO14521 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19■□□□□ 0.63
SDHDO14521 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19■□□□□ 0.63
SDHDO14521 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SDHDO14521 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SDHDO14521 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SDHDO14521 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SDHDO14521 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19■□□□□ 0.63
SDHDO14521 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19■□□□□ 0.63
SDHDO14521 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19■□□□□ 0.63
SDHDO14521 CYP2T3P-201ENST00000601990 817 ntBASIC19■□□□□ 0.63
SDHDO14521 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19■□□□□ 0.63
SDHDO14521 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms