Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CAPN8A6NHC0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CAPN8A6NHC0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CAPN8A6NHC0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CAPN8A6NHC0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.99■□□□□ 0.79
CAPN8A6NHC0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.99■□□□□ 0.79
CAPN8A6NHC0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.99■□□□□ 0.79
CAPN8A6NHC0 AC120498.8-201ENST00000614275 531 ntBASIC19.99■□□□□ 0.79
CAPN8A6NHC0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CAPN8A6NHC0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CAPN8A6NHC0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CAPN8A6NHC0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.99■□□□□ 0.79
CAPN8A6NHC0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CAPN8A6NHC0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CAPN8A6NHC0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CAPN8A6NHC0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
CAPN8A6NHC0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN8A6NHC0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN8A6NHC0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN8A6NHC0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN8A6NHC0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.98■□□□□ 0.79
CAPN8A6NHC0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN8A6NHC0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
CAPN8A6NHC0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN8A6NHC0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN8A6NHC0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN8A6NHC0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CAPN8A6NHC0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.98■□□□□ 0.79
CAPN8A6NHC0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN8A6NHC0 POM121L13P-201ENST00000422362 380 ntBASIC19.98■□□□□ 0.79
CAPN8A6NHC0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.98■□□□□ 0.79
CAPN8A6NHC0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CAPN8A6NHC0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.98■□□□□ 0.79
CAPN8A6NHC0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN8A6NHC0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
CAPN8A6NHC0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN8A6NHC0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CAPN8A6NHC0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CAPN8A6NHC0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CAPN8A6NHC0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.98■□□□□ 0.79
CAPN8A6NHC0 AC099778.1-201ENST00000568593 1911 ntBASIC19.98■□□□□ 0.79
CAPN8A6NHC0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN8A6NHC0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.97■□□□□ 0.79
CAPN8A6NHC0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN8A6NHC0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN8A6NHC0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN8A6NHC0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN8A6NHC0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.97■□□□□ 0.79
CAPN8A6NHC0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.97■□□□□ 0.79
CAPN8A6NHC0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN8A6NHC0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.97■□□□□ 0.79
CAPN8A6NHC0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.97■□□□□ 0.79
CAPN8A6NHC0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN8A6NHC0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN8A6NHC0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.97■□□□□ 0.79
CAPN8A6NHC0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.97■□□□□ 0.79
CAPN8A6NHC0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.97■□□□□ 0.79
CAPN8A6NHC0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.97■□□□□ 0.79
CAPN8A6NHC0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN8A6NHC0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.97■□□□□ 0.79
CAPN8A6NHC0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CAPN8A6NHC0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CAPN8A6NHC0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN8A6NHC0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN8A6NHC0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN8A6NHC0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN8A6NHC0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN8A6NHC0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.96■□□□□ 0.79
CAPN8A6NHC0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN8A6NHC0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN8A6NHC0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CAPN8A6NHC0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN8A6NHC0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN8A6NHC0 MIR718-201ENST00000390190 70 ntBASIC19.96■□□□□ 0.79
CAPN8A6NHC0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.96■□□□□ 0.79
CAPN8A6NHC0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.96■□□□□ 0.79
CAPN8A6NHC0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.96■□□□□ 0.79
CAPN8A6NHC0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN8A6NHC0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.96■□□□□ 0.79
CAPN8A6NHC0 AC073912.3-201ENST00000624414 853 ntBASIC19.96■□□□□ 0.79
CAPN8A6NHC0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.96■□□□□ 0.79
CAPN8A6NHC0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN8A6NHC0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN8A6NHC0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CAPN8A6NHC0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN8A6NHC0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN8A6NHC0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN8A6NHC0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN8A6NHC0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN8A6NHC0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN8A6NHC0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN8A6NHC0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CAPN8A6NHC0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.95■□□□□ 0.78
CAPN8A6NHC0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.95■□□□□ 0.78
CAPN8A6NHC0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.78
CAPN8A6NHC0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CAPN8A6NHC0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CAPN8A6NHC0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.95■□□□□ 0.78
CAPN8A6NHC0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CAPN8A6NHC0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms