Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 CROCCP1-201ENST00000426910 5675 ntBASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
TRAV8-4A0A0B4J246 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 FZD10-202ENST00000539839 3282 ntBASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 UBE2DNL-204ENST00000602536 740 ntBASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 MIR2861-201ENST00000636310 90 ntBASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 TNXA-203ENST00000507684 2038 ntBASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-4A0A0B4J246 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 AC020907.5-201ENST00000624372 1936 ntBASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 AL162412.1-201ENST00000567129 965 ntBASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 AC092720.2-201ENST00000602388 1665 ntBASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 AC020916.1-201ENST00000587762 1774 ntBASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-4A0A0B4J246 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV8-4A0A0B4J246 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV8-4A0A0B4J246 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV8-4A0A0B4J246 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-4A0A0B4J246 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
TRAV8-4A0A0B4J246 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-4A0A0B4J246 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-4A0A0B4J246 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRAV8-4A0A0B4J246 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TRAV8-4A0A0B4J246 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-4A0A0B4J246 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-4A0A0B4J246 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-4A0A0B4J246 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRAV8-4A0A0B4J246 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-4A0A0B4J246 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-4A0A0B4J246 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-4A0A0B4J246 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-4A0A0B4J246 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAV8-4A0A0B4J246 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms