Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 PHGDH-210ENST00000641115 1638 ntBASIC14.9□□□□□ -0.02
TRAV2A0A0B4J234 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV2A0A0B4J234 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
TRAV2A0A0B4J234 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV2A0A0B4J234 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV2A0A0B4J234 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV2A0A0B4J234 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV2A0A0B4J234 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV2A0A0B4J234 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV2A0A0B4J234 TCF3P1-201ENST00000423021 1937 ntBASIC14.9□□□□□ -0.02
TRAV2A0A0B4J234 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV2A0A0B4J234 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.9□□□□□ -0.02
TRAV2A0A0B4J234 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV2A0A0B4J234 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 UNC93B5-201ENST00000530315 699 ntBASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 AL121906.2-201ENST00000621597 723 ntBASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 AC090340.1-201ENST00000620778 4980 ntBASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV2A0A0B4J234 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV2A0A0B4J234 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms