Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 AC018553.1-201ENST00000616682 1458 ntBASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 AC016769.1-201ENST00000409132 1010 ntBASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 AC116351.2-201ENST00000606540 1585 ntBASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 CROCCP3-202ENST00000420820 1947 ntBASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRBV5-3A0A0A0MS03 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 AC231657.2-201ENST00000624556 255 ntBASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 AC008694.1-202ENST00000636953 945 ntBASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-3A0A0A0MS03 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 AL512625.2-201ENST00000417533 625 ntBASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 AC093787.1-201ENST00000450396 207 ntBASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-3A0A0A0MS03 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.46■□□□□ 0.55
TRBV5-3A0A0A0MS03 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.46■□□□□ 0.55
TRBV5-3A0A0A0MS03 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TRBV5-3A0A0A0MS03 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms