Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 AL118508.1-201ENST00000613502 2345 ntBASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.76
LINC01558Q9Y6Z2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
LINC01558Q9Y6Z2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
LINC01558Q9Y6Z2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
LINC01558Q9Y6Z2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.76
LINC01558Q9Y6Z2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
LINC01558Q9Y6Z2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
LINC01558Q9Y6Z2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
LINC01558Q9Y6Z2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
LINC01558Q9Y6Z2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC10.27□□□□□ -0.76
LINC01558Q9Y6Z2 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
LINC01558Q9Y6Z2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC10.27□□□□□ -0.76
LINC01558Q9Y6Z2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
LINC01558Q9Y6Z2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
LINC01558Q9Y6Z2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
LINC01558Q9Y6Z2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC10.27□□□□□ -0.76
LINC01558Q9Y6Z2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 AC092720.2-201ENST00000602388 1665 ntBASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC10.27□□□□□ -0.77
LINC01558Q9Y6Z2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 AC073592.3-201ENST00000625118 1834 ntBASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 AC068418.2-201ENST00000577309 3703 ntBASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 KRT18P10-201ENST00000388836 1287 ntBASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 LINC00896-202ENST00000609602 2128 ntBASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01558Q9Y6Z2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms