Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 LINC01521-201ENST00000504184 1943 ntBASIC20.14■□□□□ 0.81
EBF1Q9UH73 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.14■□□□□ 0.81
EBF1Q9UH73 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
EBF1Q9UH73 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
EBF1Q9UH73 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EBF1Q9UH73 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.14■□□□□ 0.81
EBF1Q9UH73 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EBF1Q9UH73 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.14■□□□□ 0.81
EBF1Q9UH73 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EBF1Q9UH73 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EBF1Q9UH73 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EBF1Q9UH73 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EBF1Q9UH73 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EBF1Q9UH73 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EBF1Q9UH73 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
EBF1Q9UH73 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.13■□□□□ 0.81
EBF1Q9UH73 AL031963.3-201ENST00000606441 850 ntBASIC20.13■□□□□ 0.81
EBF1Q9UH73 AP000525.1-201ENST00000608286 694 ntBASIC20.13■□□□□ 0.81
EBF1Q9UH73 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.13■□□□□ 0.81
EBF1Q9UH73 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
EBF1Q9UH73 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EBF1Q9UH73 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.13■□□□□ 0.81
EBF1Q9UH73 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EBF1Q9UH73 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
EBF1Q9UH73 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EBF1Q9UH73 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EBF1Q9UH73 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EBF1Q9UH73 AC121338.2-201ENST00000622535 1744 ntBASIC20.13■□□□□ 0.81
EBF1Q9UH73 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EBF1Q9UH73 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EBF1Q9UH73 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EBF1Q9UH73 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EBF1Q9UH73 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.12■□□□□ 0.81
EBF1Q9UH73 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EBF1Q9UH73 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EBF1Q9UH73 KRT8P9-201ENST00000558927 1449 ntBASIC20.12■□□□□ 0.81
EBF1Q9UH73 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.12■□□□□ 0.81
EBF1Q9UH73 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EBF1Q9UH73 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EBF1Q9UH73 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.12■□□□□ 0.81
EBF1Q9UH73 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.12■□□□□ 0.81
EBF1Q9UH73 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.12■□□□□ 0.81
EBF1Q9UH73 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.12■□□□□ 0.81
EBF1Q9UH73 AC116562.2-201ENST00000507042 360 ntBASIC20.12■□□□□ 0.81
EBF1Q9UH73 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EBF1Q9UH73 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.12■□□□□ 0.81
EBF1Q9UH73 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.12■□□□□ 0.81
EBF1Q9UH73 AL049796.1-201ENST00000565336 1766 ntBASIC20.12■□□□□ 0.81
EBF1Q9UH73 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
EBF1Q9UH73 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EBF1Q9UH73 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.12■□□□□ 0.81
EBF1Q9UH73 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.12■□□□□ 0.81
EBF1Q9UH73 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EBF1Q9UH73 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EBF1Q9UH73 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
EBF1Q9UH73 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
EBF1Q9UH73 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.12■□□□□ 0.81
EBF1Q9UH73 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
EBF1Q9UH73 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
EBF1Q9UH73 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
EBF1Q9UH73 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.11■□□□□ 0.81
EBF1Q9UH73 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EBF1Q9UH73 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.11■□□□□ 0.81
EBF1Q9UH73 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EBF1Q9UH73 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.11■□□□□ 0.81
EBF1Q9UH73 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EBF1Q9UH73 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
EBF1Q9UH73 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EBF1Q9UH73 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.11■□□□□ 0.81
EBF1Q9UH73 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EBF1Q9UH73 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
EBF1Q9UH73 AC005521.1-201ENST00000393351 872 ntBASIC20.11■□□□□ 0.81
EBF1Q9UH73 MIR1238-201ENST00000408483 83 ntBASIC20.11■□□□□ 0.81
EBF1Q9UH73 AC113347.1-201ENST00000413321 391 ntBASIC20.11■□□□□ 0.81
EBF1Q9UH73 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.11■□□□□ 0.81
EBF1Q9UH73 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.11■□□□□ 0.81
EBF1Q9UH73 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EBF1Q9UH73 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
EBF1Q9UH73 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EBF1Q9UH73 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
EBF1Q9UH73 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
EBF1Q9UH73 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
EBF1Q9UH73 LINC01568-207ENST00000641790 1380 ntBASIC20.1■□□□□ 0.81
EBF1Q9UH73 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
EBF1Q9UH73 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
EBF1Q9UH73 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.1■□□□□ 0.81
EBF1Q9UH73 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.1■□□□□ 0.81
EBF1Q9UH73 KSR1P1-201ENST00000446298 240 ntBASIC20.1■□□□□ 0.81
EBF1Q9UH73 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EBF1Q9UH73 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
EBF1Q9UH73 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.1■□□□□ 0.81
EBF1Q9UH73 FITM1-202ENST00000559294 800 ntBASIC20.1■□□□□ 0.81
EBF1Q9UH73 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.1■□□□□ 0.81
EBF1Q9UH73 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.1■□□□□ 0.81
EBF1Q9UH73 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EBF1Q9UH73 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EBF1Q9UH73 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EBF1Q9UH73 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EBF1Q9UH73 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EBF1Q9UH73 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms