Protein–RNA interactions for Protein: Q9NZE8

MRPL35, 39S ribosomal protein L35, mitochondrial, humanhuman

Known RBP Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35Q9NZE8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.02□□□□□ -0.16
MRPL35Q9NZE8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC14.02□□□□□ -0.16
MRPL35Q9NZE8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
MRPL35Q9NZE8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC14.02□□□□□ -0.16
MRPL35Q9NZE8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
MRPL35Q9NZE8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
MRPL35Q9NZE8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MRPL35Q9NZE8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
MRPL35Q9NZE8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC14.02□□□□□ -0.17
MRPL35Q9NZE8 AC131281.2-201ENST00000520478 145 ntBASIC14.02□□□□□ -0.17
MRPL35Q9NZE8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
MRPL35Q9NZE8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
MRPL35Q9NZE8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.02□□□□□ -0.17
MRPL35Q9NZE8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.02□□□□□ -0.17
MRPL35Q9NZE8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.02□□□□□ -0.17
MRPL35Q9NZE8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MRPL35Q9NZE8 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MRPL35Q9NZE8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.02□□□□□ -0.17
MRPL35Q9NZE8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
MRPL35Q9NZE8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 AP000997.3-201ENST00000623333 2250 ntBASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 DPP3P2-201ENST00000416030 1696 ntBASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.01□□□□□ -0.17
MRPL35Q9NZE8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14□□□□□ -0.17
MRPL35Q9NZE8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14□□□□□ -0.17
MRPL35Q9NZE8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL35Q9NZE8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
MRPL35Q9NZE8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14□□□□□ -0.17
MRPL35Q9NZE8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL35Q9NZE8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL35Q9NZE8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL35Q9NZE8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL35Q9NZE8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
MRPL35Q9NZE8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14□□□□□ -0.17
MRPL35Q9NZE8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14□□□□□ -0.17
MRPL35Q9NZE8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL35Q9NZE8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14□□□□□ -0.17
MRPL35Q9NZE8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL35Q9NZE8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14□□□□□ -0.17
MRPL35Q9NZE8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14□□□□□ -0.17
MRPL35Q9NZE8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL35Q9NZE8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL35Q9NZE8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
MRPL35Q9NZE8 MIR2861-201ENST00000636310 90 ntBASIC14□□□□□ -0.17
MRPL35Q9NZE8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL35Q9NZE8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14□□□□□ -0.17
MRPL35Q9NZE8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL35Q9NZE8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL35Q9NZE8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
MRPL35Q9NZE8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL35Q9NZE8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL35Q9NZE8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14□□□□□ -0.17
MRPL35Q9NZE8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
MRPL35Q9NZE8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL35Q9NZE8 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL35Q9NZE8 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL35Q9NZE8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
MRPL35Q9NZE8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL35Q9NZE8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL35Q9NZE8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
MRPL35Q9NZE8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL35Q9NZE8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC13.99□□□□□ -0.17
MRPL35Q9NZE8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC13.99□□□□□ -0.17
MRPL35Q9NZE8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
MRPL35Q9NZE8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL35Q9NZE8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL35Q9NZE8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL35Q9NZE8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC13.99□□□□□ -0.17
MRPL35Q9NZE8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL35Q9NZE8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC13.99□□□□□ -0.17
MRPL35Q9NZE8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
MRPL35Q9NZE8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL35Q9NZE8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL35Q9NZE8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms