Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.35■□□□□ 0.69
NLGN3Q9NZ94 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 PLK5-205ENST00000642079 1969 ntBASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 AC116562.2-201ENST00000507042 360 ntBASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 AP000525.1-201ENST00000608286 694 ntBASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 MIR6786-201ENST00000616843 113 ntBASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.34■□□□□ 0.69
NLGN3Q9NZ94 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
NLGN3Q9NZ94 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
NLGN3Q9NZ94 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NLGN3Q9NZ94 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.33■□□□□ 0.68
NLGN3Q9NZ94 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.33■□□□□ 0.68
NLGN3Q9NZ94 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.33■□□□□ 0.68
NLGN3Q9NZ94 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
NLGN3Q9NZ94 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NLGN3Q9NZ94 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NLGN3Q9NZ94 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 MIR1238-201ENST00000408483 83 ntBASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 RN7SL850P-201ENST00000579959 291 ntBASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NLGN3Q9NZ94 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.31■□□□□ 0.68
NLGN3Q9NZ94 AP006587.1-201ENST00000534129 1502 ntBASIC19.31■□□□□ 0.68
NLGN3Q9NZ94 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NLGN3Q9NZ94 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NLGN3Q9NZ94 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NLGN3Q9NZ94 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NLGN3Q9NZ94 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NLGN3Q9NZ94 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.31■□□□□ 0.68
NLGN3Q9NZ94 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.31■□□□□ 0.68
NLGN3Q9NZ94 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NLGN3Q9NZ94 AC005363.2-201ENST00000618631 242 ntBASIC19.31■□□□□ 0.68
NLGN3Q9NZ94 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NLGN3Q9NZ94 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NLGN3Q9NZ94 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NLGN3Q9NZ94 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.31■□□□□ 0.68
NLGN3Q9NZ94 KRT8P9-201ENST00000558927 1449 ntBASIC19.31■□□□□ 0.68
NLGN3Q9NZ94 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NLGN3Q9NZ94 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.31■□□□□ 0.68
NLGN3Q9NZ94 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.31■□□□□ 0.68
NLGN3Q9NZ94 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.31■□□□□ 0.68
NLGN3Q9NZ94 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NLGN3Q9NZ94 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NLGN3Q9NZ94 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
NLGN3Q9NZ94 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NLGN3Q9NZ94 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NLGN3Q9NZ94 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NLGN3Q9NZ94 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.3■□□□□ 0.68
NLGN3Q9NZ94 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 213.5 ms