Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCM2LQ9NUG4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2LQ9NUG4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2LQ9NUG4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2LQ9NUG4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
CCM2LQ9NUG4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.75■□□□□ 0.59
CCM2LQ9NUG4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2LQ9NUG4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.75■□□□□ 0.59
CCM2LQ9NUG4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.75■□□□□ 0.59
CCM2LQ9NUG4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2LQ9NUG4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CCM2LQ9NUG4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2LQ9NUG4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2LQ9NUG4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.75■□□□□ 0.59
CCM2LQ9NUG4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.75■□□□□ 0.59
CCM2LQ9NUG4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.75■□□□□ 0.59
CCM2LQ9NUG4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2LQ9NUG4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.75■□□□□ 0.59
CCM2LQ9NUG4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2LQ9NUG4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2LQ9NUG4 AC009237.14-201ENST00000609975 1594 ntBASIC18.75■□□□□ 0.59
CCM2LQ9NUG4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCM2LQ9NUG4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.75■□□□□ 0.59
CCM2LQ9NUG4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCM2LQ9NUG4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCM2LQ9NUG4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCM2LQ9NUG4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCM2LQ9NUG4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCM2LQ9NUG4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCM2LQ9NUG4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCM2LQ9NUG4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCM2LQ9NUG4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCM2LQ9NUG4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.74■□□□□ 0.59
CCM2LQ9NUG4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.74■□□□□ 0.59
CCM2LQ9NUG4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.74■□□□□ 0.59
CCM2LQ9NUG4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.74■□□□□ 0.59
CCM2LQ9NUG4 AL121832.2-201ENST00000610979 668 ntBASIC18.74■□□□□ 0.59
CCM2LQ9NUG4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.74■□□□□ 0.59
CCM2LQ9NUG4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCM2LQ9NUG4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCM2LQ9NUG4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCM2LQ9NUG4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCM2LQ9NUG4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCM2LQ9NUG4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.74■□□□□ 0.59
CCM2LQ9NUG4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCM2LQ9NUG4 AC005082.1-201ENST00000413042 2259 ntBASIC18.74■□□□□ 0.59
CCM2LQ9NUG4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCM2LQ9NUG4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CCM2LQ9NUG4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCM2LQ9NUG4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.73■□□□□ 0.59
CCM2LQ9NUG4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCM2LQ9NUG4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCM2LQ9NUG4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CCM2LQ9NUG4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CCM2LQ9NUG4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCM2LQ9NUG4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CCM2LQ9NUG4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCM2LQ9NUG4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.73■□□□□ 0.59
CCM2LQ9NUG4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.73■□□□□ 0.59
CCM2LQ9NUG4 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.73■□□□□ 0.59
CCM2LQ9NUG4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCM2LQ9NUG4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCM2LQ9NUG4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCM2LQ9NUG4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCM2LQ9NUG4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CCM2LQ9NUG4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCM2LQ9NUG4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
CCM2LQ9NUG4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.72■□□□□ 0.59
CCM2LQ9NUG4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.72■□□□□ 0.59
CCM2LQ9NUG4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCM2LQ9NUG4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CCM2LQ9NUG4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCM2LQ9NUG4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCM2LQ9NUG4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCM2LQ9NUG4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CCM2LQ9NUG4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.72■□□□□ 0.59
CCM2LQ9NUG4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCM2LQ9NUG4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCM2LQ9NUG4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.72■□□□□ 0.59
CCM2LQ9NUG4 AC083906.2-201ENST00000511578 360 ntBASIC18.72■□□□□ 0.59
CCM2LQ9NUG4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.72■□□□□ 0.59
CCM2LQ9NUG4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.72■□□□□ 0.59
CCM2LQ9NUG4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.72■□□□□ 0.59
CCM2LQ9NUG4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCM2LQ9NUG4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.72■□□□□ 0.59
CCM2LQ9NUG4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.72■□□□□ 0.59
CCM2LQ9NUG4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCM2LQ9NUG4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCM2LQ9NUG4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.72■□□□□ 0.59
CCM2LQ9NUG4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCM2LQ9NUG4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms