Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 HES2-206ENST00000489730 730 ntTSL 2 BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 RGMA-211ENST00000557420 989 ntTSL 3 BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 AC142086.2-201ENST00000569753 217 ntBASIC24.93■■□□□ 1.58
CHMP4BQ9H444 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 AC092368.3-202ENST00000574180 1591 ntBASIC24.93■■□□□ 1.58
CHMP4BQ9H444 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC24.92■■□□□ 1.58
CHMP4BQ9H444 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHMP4BQ9H444 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
CHMP4BQ9H444 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHMP4BQ9H444 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CHMP4BQ9H444 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHMP4BQ9H444 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHMP4BQ9H444 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC24.92■■□□□ 1.58
CHMP4BQ9H444 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CHMP4BQ9H444 AC069152.1-201ENST00000438030 544 ntBASIC24.92■■□□□ 1.58
CHMP4BQ9H444 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC24.92■■□□□ 1.58
CHMP4BQ9H444 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC24.92■■□□□ 1.58
CHMP4BQ9H444 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC24.92■■□□□ 1.58
CHMP4BQ9H444 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC24.92■■□□□ 1.58
CHMP4BQ9H444 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC24.92■■□□□ 1.58
CHMP4BQ9H444 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC24.92■■□□□ 1.58
CHMP4BQ9H444 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.92■■□□□ 1.58
CHMP4BQ9H444 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC24.92■■□□□ 1.58
CHMP4BQ9H444 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHMP4BQ9H444 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC24.92■■□□□ 1.58
CHMP4BQ9H444 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHMP4BQ9H444 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHMP4BQ9H444 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CHMP4BQ9H444 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHMP4BQ9H444 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC24.91■■□□□ 1.58
CHMP4BQ9H444 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CHMP4BQ9H444 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHMP4BQ9H444 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHMP4BQ9H444 TREX1-205ENST00000625293 1783 ntBASIC24.91■■□□□ 1.58
CHMP4BQ9H444 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC24.91■■□□□ 1.58
CHMP4BQ9H444 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHMP4BQ9H444 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHMP4BQ9H444 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CHMP4BQ9H444 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
CHMP4BQ9H444 REXO2-208ENST00000539754 791 ntTSL 2 BASIC24.91■■□□□ 1.58
CHMP4BQ9H444 AC104771.1-201ENST00000603335 964 ntBASIC24.91■■□□□ 1.58
CHMP4BQ9H444 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
CHMP4BQ9H444 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.91■■□□□ 1.58
CHMP4BQ9H444 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CHMP4BQ9H444 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC24.91■■□□□ 1.58
CHMP4BQ9H444 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC24.91■■□□□ 1.58
CHMP4BQ9H444 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC24.91■■□□□ 1.58
CHMP4BQ9H444 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC24.91■■□□□ 1.58
CHMP4BQ9H444 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC24.91■■□□□ 1.58
CHMP4BQ9H444 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC24.91■■□□□ 1.58
CHMP4BQ9H444 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC24.91■■□□□ 1.58
CHMP4BQ9H444 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHMP4BQ9H444 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CHMP4BQ9H444 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHMP4BQ9H444 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHMP4BQ9H444 ABHD17AP6-201ENST00000458502 1044 ntBASIC24.9■■□□□ 1.58
CHMP4BQ9H444 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC24.9■■□□□ 1.58
CHMP4BQ9H444 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC24.9■■□□□ 1.58
CHMP4BQ9H444 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC24.9■■□□□ 1.58
CHMP4BQ9H444 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHMP4BQ9H444 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CHMP4BQ9H444 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC24.9■■□□□ 1.58
CHMP4BQ9H444 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC24.89■■□□□ 1.58
CHMP4BQ9H444 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC24.89■■□□□ 1.58
CHMP4BQ9H444 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CHMP4BQ9H444 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC24.89■■□□□ 1.58
CHMP4BQ9H444 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
CHMP4BQ9H444 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC24.89■■□□□ 1.58
CHMP4BQ9H444 PNMA6B-201ENST00000538162 1200 ntBASIC24.89■■□□□ 1.58
CHMP4BQ9H444 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CHMP4BQ9H444 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC24.89■■□□□ 1.57
CHMP4BQ9H444 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CHMP4BQ9H444 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC24.89■■□□□ 1.57
CHMP4BQ9H444 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC24.89■■□□□ 1.57
CHMP4BQ9H444 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC24.88■■□□□ 1.57
CHMP4BQ9H444 TFP1-202ENST00000475455 1573 ntBASIC24.88■■□□□ 1.57
CHMP4BQ9H444 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHMP4BQ9H444 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
CHMP4BQ9H444 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHMP4BQ9H444 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC24.88■■□□□ 1.57
CHMP4BQ9H444 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
CHMP4BQ9H444 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC24.88■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms