Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
LRRC39Q96DD0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.95■□□□□ 0.78
LRRC39Q96DD0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC39Q96DD0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC39Q96DD0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC39Q96DD0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC39Q96DD0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
LRRC39Q96DD0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
LRRC39Q96DD0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.95■□□□□ 0.78
LRRC39Q96DD0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC39Q96DD0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC39Q96DD0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
LRRC39Q96DD0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRC39Q96DD0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC39Q96DD0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC39Q96DD0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC39Q96DD0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC39Q96DD0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LRRC39Q96DD0 AC026271.2-201ENST00000428091 497 ntBASIC19.94■□□□□ 0.78
LRRC39Q96DD0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRC39Q96DD0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRC39Q96DD0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.94■□□□□ 0.78
LRRC39Q96DD0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC39Q96DD0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LRRC39Q96DD0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
LRRC39Q96DD0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRC39Q96DD0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRC39Q96DD0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC39Q96DD0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC39Q96DD0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC39Q96DD0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRC39Q96DD0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC39Q96DD0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC39Q96DD0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC39Q96DD0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.93■□□□□ 0.78
LRRC39Q96DD0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC39Q96DD0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC39Q96DD0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.93■□□□□ 0.78
LRRC39Q96DD0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.93■□□□□ 0.78
LRRC39Q96DD0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.93■□□□□ 0.78
LRRC39Q96DD0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC39Q96DD0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.93■□□□□ 0.78
LRRC39Q96DD0 AL020996.1-203ENST00000536896 2307 ntBASIC19.93■□□□□ 0.78
LRRC39Q96DD0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC39Q96DD0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
LRRC39Q96DD0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRC39Q96DD0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LRRC39Q96DD0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC39Q96DD0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC39Q96DD0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC39Q96DD0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC39Q96DD0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
LRRC39Q96DD0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC39Q96DD0 KRT17P1-201ENST00000399211 1546 ntBASIC19.92■□□□□ 0.78
LRRC39Q96DD0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
LRRC39Q96DD0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC39Q96DD0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC39Q96DD0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
LRRC39Q96DD0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC39Q96DD0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC39Q96DD0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC39Q96DD0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC39Q96DD0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC39Q96DD0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC39Q96DD0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC39Q96DD0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LRRC39Q96DD0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRC39Q96DD0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.91■□□□□ 0.78
LRRC39Q96DD0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
LRRC39Q96DD0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC39Q96DD0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.9■□□□□ 0.78
LRRC39Q96DD0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms