Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.01■□□□□ 0.63
UBE2E3Q969T4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.01■□□□□ 0.63
UBE2E3Q969T4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.01■□□□□ 0.63
UBE2E3Q969T4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
UBE2E3Q969T4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
UBE2E3Q969T4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.01■□□□□ 0.63
UBE2E3Q969T4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.01■□□□□ 0.63
UBE2E3Q969T4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
UBE2E3Q969T4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
UBE2E3Q969T4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
UBE2E3Q969T4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19■□□□□ 0.63
UBE2E3Q969T4 AFG3L1P-217ENST00000557444 2447 ntBASIC19■□□□□ 0.63
UBE2E3Q969T4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBE2E3Q969T4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBE2E3Q969T4 ABHD17AP6-201ENST00000458502 1044 ntBASIC19■□□□□ 0.63
UBE2E3Q969T4 HES2-206ENST00000489730 730 ntTSL 2 BASIC19■□□□□ 0.63
UBE2E3Q969T4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19■□□□□ 0.63
UBE2E3Q969T4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19■□□□□ 0.63
UBE2E3Q969T4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19■□□□□ 0.63
UBE2E3Q969T4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
UBE2E3Q969T4 PNMA6B-201ENST00000538162 1200 ntBASIC19■□□□□ 0.63
UBE2E3Q969T4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19■□□□□ 0.63
UBE2E3Q969T4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19■□□□□ 0.63
UBE2E3Q969T4 AC083880.1-201ENST00000608266 535 ntBASIC19■□□□□ 0.63
UBE2E3Q969T4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
UBE2E3Q969T4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBE2E3Q969T4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19■□□□□ 0.63
UBE2E3Q969T4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19■□□□□ 0.63
UBE2E3Q969T4 AC116351.2-201ENST00000606540 1585 ntBASIC19■□□□□ 0.63
UBE2E3Q969T4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBE2E3Q969T4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
UBE2E3Q969T4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBE2E3Q969T4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBE2E3Q969T4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
UBE2E3Q969T4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
UBE2E3Q969T4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE2E3Q969T4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE2E3Q969T4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
UBE2E3Q969T4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.99■□□□□ 0.63
UBE2E3Q969T4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.99■□□□□ 0.63
UBE2E3Q969T4 AC018553.1-201ENST00000616682 1458 ntBASIC18.99■□□□□ 0.63
UBE2E3Q969T4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBE2E3Q969T4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE2E3Q969T4 AC098934.4-201ENST00000564127 592 ntBASIC18.99■□□□□ 0.63
UBE2E3Q969T4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.99■□□□□ 0.63
UBE2E3Q969T4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
UBE2E3Q969T4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE2E3Q969T4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.99■□□□□ 0.63
UBE2E3Q969T4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBE2E3Q969T4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.99■□□□□ 0.63
UBE2E3Q969T4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE2E3Q969T4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
UBE2E3Q969T4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.98■□□□□ 0.63
UBE2E3Q969T4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBE2E3Q969T4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.98■□□□□ 0.63
UBE2E3Q969T4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
UBE2E3Q969T4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBE2E3Q969T4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
UBE2E3Q969T4 ID1-201ENST00000376105 1233 ntBASIC18.98■□□□□ 0.63
UBE2E3Q969T4 HLA-L-209ENST00000420110 1011 ntBASIC18.98■□□□□ 0.63
UBE2E3Q969T4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.98■□□□□ 0.63
UBE2E3Q969T4 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.98■□□□□ 0.63
UBE2E3Q969T4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBE2E3Q969T4 AC006557.6-201ENST00000623071 864 ntBASIC18.98■□□□□ 0.63
UBE2E3Q969T4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.98■□□□□ 0.63
UBE2E3Q969T4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBE2E3Q969T4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
UBE2E3Q969T4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBE2E3Q969T4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.98■□□□□ 0.63
UBE2E3Q969T4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBE2E3Q969T4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBE2E3Q969T4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.98■□□□□ 0.63
UBE2E3Q969T4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
UBE2E3Q969T4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.98■□□□□ 0.63
UBE2E3Q969T4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBE2E3Q969T4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBE2E3Q969T4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBE2E3Q969T4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 AL355802.2-201ENST00000402069 882 ntBASIC18.97■□□□□ 0.63
UBE2E3Q969T4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms