Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
SMARCC1Q92922 WDR88-203ENST00000592765 651 ntTSL 5 BASIC25.38■■□□□ 1.65
SMARCC1Q92922 DBP-204ENST00000599385 709 ntTSL 3 BASIC25.38■■□□□ 1.65
SMARCC1Q92922 AP000550.4-202ENST00000639755 178 ntBASIC25.38■■□□□ 1.65
SMARCC1Q92922 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
SMARCC1Q92922 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
SMARCC1Q92922 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC25.38■■□□□ 1.65
SMARCC1Q92922 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC25.38■■□□□ 1.65
SMARCC1Q92922 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SMARCC1Q92922 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SMARCC1Q92922 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
SMARCC1Q92922 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SMARCC1Q92922 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SMARCC1Q92922 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
SMARCC1Q92922 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SMARCC1Q92922 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SMARCC1Q92922 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SMARCC1Q92922 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SMARCC1Q92922 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SMARCC1Q92922 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
SMARCC1Q92922 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SMARCC1Q92922 AC133561.1-201ENST00000568600 2415 ntBASIC25.36■■□□□ 1.65
SMARCC1Q92922 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC25.36■■□□□ 1.65
SMARCC1Q92922 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SMARCC1Q92922 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
SMARCC1Q92922 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC25.36■■□□□ 1.65
SMARCC1Q92922 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SMARCC1Q92922 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SMARCC1Q92922 AC007663.1-201ENST00000438948 1240 ntBASIC25.36■■□□□ 1.65
SMARCC1Q92922 AC092647.4-201ENST00000457211 535 ntBASIC25.36■■□□□ 1.65
SMARCC1Q92922 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
SMARCC1Q92922 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC25.36■■□□□ 1.65
SMARCC1Q92922 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SMARCC1Q92922 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
SMARCC1Q92922 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SMARCC1Q92922 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SMARCC1Q92922 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SMARCC1Q92922 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SMARCC1Q92922 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SMARCC1Q92922 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC25.36■■□□□ 1.65
SMARCC1Q92922 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SMARCC1Q92922 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SMARCC1Q92922 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SMARCC1Q92922 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SMARCC1Q92922 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SMARCC1Q92922 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC25.35■■□□□ 1.65
SMARCC1Q92922 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC25.35■■□□□ 1.65
SMARCC1Q92922 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC25.35■■□□□ 1.65
SMARCC1Q92922 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
SMARCC1Q92922 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC25.35■■□□□ 1.65
SMARCC1Q92922 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
SMARCC1Q92922 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC25.35■■□□□ 1.65
SMARCC1Q92922 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SMARCC1Q92922 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
SMARCC1Q92922 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SMARCC1Q92922 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SMARCC1Q92922 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC25.35■■□□□ 1.65
SMARCC1Q92922 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SMARCC1Q92922 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC25.35■■□□□ 1.65
SMARCC1Q92922 PLK5-205ENST00000642079 1969 ntBASIC25.35■■□□□ 1.65
SMARCC1Q92922 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SMARCC1Q92922 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SMARCC1Q92922 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
SMARCC1Q92922 KRT18P56-201ENST00000507275 550 ntBASIC25.34■■□□□ 1.65
SMARCC1Q92922 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SMARCC1Q92922 AC092338.2-201ENST00000568827 1415 ntBASIC25.34■■□□□ 1.65
SMARCC1Q92922 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SMARCC1Q92922 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
SMARCC1Q92922 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC25.34■■□□□ 1.65
SMARCC1Q92922 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SMARCC1Q92922 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
SMARCC1Q92922 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC25.33■■□□□ 1.65
SMARCC1Q92922 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SMARCC1Q92922 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SMARCC1Q92922 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
SMARCC1Q92922 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SMARCC1Q92922 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC25.33■■□□□ 1.65
SMARCC1Q92922 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SMARCC1Q92922 AC009947.2-201ENST00000444014 672 ntBASIC25.33■■□□□ 1.65
SMARCC1Q92922 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
SMARCC1Q92922 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC25.33■■□□□ 1.65
SMARCC1Q92922 TOLLIP-AS1-201ENST00000530897 939 ntBASIC25.33■■□□□ 1.65
SMARCC1Q92922 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC25.33■■□□□ 1.65
SMARCC1Q92922 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SMARCC1Q92922 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC25.33■■□□□ 1.65
SMARCC1Q92922 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC25.33■■□□□ 1.65
SMARCC1Q92922 AC141257.4-201ENST00000634557 245 ntBASIC25.33■■□□□ 1.65
SMARCC1Q92922 AC136944.6-201ENST00000634818 245 ntBASIC25.33■■□□□ 1.65
SMARCC1Q92922 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC25.33■■□□□ 1.65
SMARCC1Q92922 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SMARCC1Q92922 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC25.33■■□□□ 1.65
SMARCC1Q92922 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC25.33■■□□□ 1.65
SMARCC1Q92922 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC25.33■■□□□ 1.65
SMARCC1Q92922 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
SMARCC1Q92922 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SMARCC1Q92922 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
SMARCC1Q92922 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SMARCC1Q92922 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
SMARCC1Q92922 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
SMARCC1Q92922 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms