Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SHC3Q92529 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHC3Q92529 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHC3Q92529 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.1■□□□□ 0.97
SHC3Q92529 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHC3Q92529 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SHC3Q92529 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SHC3Q92529 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHC3Q92529 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHC3Q92529 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHC3Q92529 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHC3Q92529 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHC3Q92529 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.1■□□□□ 0.97
SHC3Q92529 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.1■□□□□ 0.97
SHC3Q92529 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SHC3Q92529 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.1■□□□□ 0.97
SHC3Q92529 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.1■□□□□ 0.97
SHC3Q92529 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
SHC3Q92529 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SHC3Q92529 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHC3Q92529 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHC3Q92529 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHC3Q92529 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.1■□□□□ 0.97
SHC3Q92529 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHC3Q92529 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.09■□□□□ 0.97
SHC3Q92529 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.09■□□□□ 0.97
SHC3Q92529 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHC3Q92529 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHC3Q92529 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHC3Q92529 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHC3Q92529 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SHC3Q92529 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHC3Q92529 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SHC3Q92529 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.09■□□□□ 0.97
SHC3Q92529 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.09■□□□□ 0.97
SHC3Q92529 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.09■□□□□ 0.97
SHC3Q92529 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHC3Q92529 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.09■□□□□ 0.97
SHC3Q92529 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.09■□□□□ 0.97
SHC3Q92529 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.09■□□□□ 0.97
SHC3Q92529 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHC3Q92529 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHC3Q92529 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHC3Q92529 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SHC3Q92529 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.09■□□□□ 0.97
SHC3Q92529 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
SHC3Q92529 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SHC3Q92529 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SHC3Q92529 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
SHC3Q92529 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.08■□□□□ 0.97
SHC3Q92529 AC116562.4-201ENST00000641316 2276 ntBASIC21.08■□□□□ 0.97
SHC3Q92529 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
SHC3Q92529 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SHC3Q92529 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SHC3Q92529 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
SHC3Q92529 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SHC3Q92529 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
SHC3Q92529 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SHC3Q92529 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SHC3Q92529 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SHC3Q92529 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SHC3Q92529 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SHC3Q92529 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.08■□□□□ 0.97
SHC3Q92529 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.08■□□□□ 0.97
SHC3Q92529 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SHC3Q92529 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
SHC3Q92529 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
SHC3Q92529 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.08■□□□□ 0.96
SHC3Q92529 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
SHC3Q92529 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC3Q92529 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC3Q92529 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.07■□□□□ 0.96
SHC3Q92529 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC3Q92529 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC3Q92529 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC3Q92529 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC3Q92529 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SHC3Q92529 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.07■□□□□ 0.96
SHC3Q92529 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.07■□□□□ 0.96
SHC3Q92529 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.07■□□□□ 0.96
SHC3Q92529 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC3Q92529 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.07■□□□□ 0.96
SHC3Q92529 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SHC3Q92529 SOX15-203ENST00000570788 1093 ntBASIC21.07■□□□□ 0.96
SHC3Q92529 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SHC3Q92529 AC120498.8-201ENST00000614275 531 ntBASIC21.07■□□□□ 0.96
SHC3Q92529 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC3Q92529 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.07■□□□□ 0.96
SHC3Q92529 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
SHC3Q92529 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.07■□□□□ 0.96
SHC3Q92529 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.07■□□□□ 0.96
SHC3Q92529 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC3Q92529 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC3Q92529 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHC3Q92529 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SHC3Q92529 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SHC3Q92529 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SHC3Q92529 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SHC3Q92529 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
SHC3Q92529 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms