Protein–RNA interactions for Protein: Q8ND04

SMG8, Protein SMG8, humanhuman

Known RBP Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8Q8ND04 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SMG8Q8ND04 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.36■■□□□ 1.01
SMG8Q8ND04 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMG8Q8ND04 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMG8Q8ND04 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMG8Q8ND04 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMG8Q8ND04 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.35■■□□□ 1.01
SMG8Q8ND04 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMG8Q8ND04 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMG8Q8ND04 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMG8Q8ND04 TUBB8P6-201ENST00000436895 1288 ntBASIC21.35■■□□□ 1.01
SMG8Q8ND04 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMG8Q8ND04 AC116562.2-201ENST00000507042 360 ntBASIC21.35■■□□□ 1.01
SMG8Q8ND04 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.35■■□□□ 1.01
SMG8Q8ND04 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMG8Q8ND04 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMG8Q8ND04 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMG8Q8ND04 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.35■■□□□ 1.01
SMG8Q8ND04 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMG8Q8ND04 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMG8Q8ND04 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.35■■□□□ 1.01
SMG8Q8ND04 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.34■■□□□ 1.01
SMG8Q8ND04 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SMG8Q8ND04 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMG8Q8ND04 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SMG8Q8ND04 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SMG8Q8ND04 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.34■■□□□ 1.01
SMG8Q8ND04 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.34■■□□□ 1.01
SMG8Q8ND04 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SMG8Q8ND04 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.34■■□□□ 1.01
SMG8Q8ND04 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.34■■□□□ 1.01
SMG8Q8ND04 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.34■■□□□ 1.01
SMG8Q8ND04 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.34■■□□□ 1.01
SMG8Q8ND04 AC097493.4-201ENST00000641197 219 ntBASIC21.34■■□□□ 1.01
SMG8Q8ND04 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SMG8Q8ND04 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SMG8Q8ND04 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMG8Q8ND04 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
SMG8Q8ND04 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SMG8Q8ND04 MMP23A-201ENST00000234610 1017 ntBASIC21.33■■□□□ 1.01
SMG8Q8ND04 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMG8Q8ND04 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.33■■□□□ 1.01
SMG8Q8ND04 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.33■■□□□ 1.01
SMG8Q8ND04 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.33■■□□□ 1.01
SMG8Q8ND04 AL445675.2-201ENST00000620291 557 ntBASIC21.33■■□□□ 1.01
SMG8Q8ND04 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.33■■□□□ 1.01
SMG8Q8ND04 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
SMG8Q8ND04 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
SMG8Q8ND04 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.33■■□□□ 1
SMG8Q8ND04 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.33■■□□□ 1
SMG8Q8ND04 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SMG8Q8ND04 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.32■■□□□ 1
SMG8Q8ND04 FEM1AP1-201ENST00000431297 1995 ntBASIC21.32■■□□□ 1
SMG8Q8ND04 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SMG8Q8ND04 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SMG8Q8ND04 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SMG8Q8ND04 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.32■■□□□ 1
SMG8Q8ND04 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.32■■□□□ 1
SMG8Q8ND04 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.32■■□□□ 1
SMG8Q8ND04 AP000525.1-201ENST00000608286 694 ntBASIC21.32■■□□□ 1
SMG8Q8ND04 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.32■■□□□ 1
SMG8Q8ND04 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SMG8Q8ND04 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.32■■□□□ 1
SMG8Q8ND04 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.32■■□□□ 1
SMG8Q8ND04 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.31■■□□□ 1
SMG8Q8ND04 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMG8Q8ND04 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMG8Q8ND04 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.31■■□□□ 1
SMG8Q8ND04 KRT8P9-201ENST00000558927 1449 ntBASIC21.31■■□□□ 1
SMG8Q8ND04 AL162377.1-201ENST00000618844 1793 ntBASIC21.31■■□□□ 1
SMG8Q8ND04 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMG8Q8ND04 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.31■■□□□ 1
SMG8Q8ND04 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SMG8Q8ND04 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.31■■□□□ 1
SMG8Q8ND04 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.31■■□□□ 1
SMG8Q8ND04 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMG8Q8ND04 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.31■■□□□ 1
SMG8Q8ND04 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMG8Q8ND04 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
SMG8Q8ND04 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.31■■□□□ 1
SMG8Q8ND04 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.31■■□□□ 1
SMG8Q8ND04 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.31■■□□□ 1
SMG8Q8ND04 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SMG8Q8ND04 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SMG8Q8ND04 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.31■■□□□ 1
SMG8Q8ND04 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMG8Q8ND04 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
SMG8Q8ND04 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.31■■□□□ 1
SMG8Q8ND04 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.3■■□□□ 1
SMG8Q8ND04 TMEM179-206ENST00000616017 1645 ntBASIC21.3■■□□□ 1
SMG8Q8ND04 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SMG8Q8ND04 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SMG8Q8ND04 UNC93B2-201ENST00000285383 730 ntBASIC21.3■■□□□ 1
SMG8Q8ND04 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SMG8Q8ND04 MESTP1-201ENST00000404287 994 ntBASIC21.3■■□□□ 1
SMG8Q8ND04 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
SMG8Q8ND04 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.3■■□□□ 1
SMG8Q8ND04 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.3■■□□□ 1
SMG8Q8ND04 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SMG8Q8ND04 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms