Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC13.02□□□□□ -0.33
SCXQ7RTU7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SCXQ7RTU7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SCXQ7RTU7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SCXQ7RTU7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SCXQ7RTU7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
SCXQ7RTU7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SCXQ7RTU7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SCXQ7RTU7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SCXQ7RTU7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SCXQ7RTU7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC13.01□□□□□ -0.33
SCXQ7RTU7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC13.01□□□□□ -0.33
SCXQ7RTU7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC13.01□□□□□ -0.33
SCXQ7RTU7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SCXQ7RTU7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC13.01□□□□□ -0.33
SCXQ7RTU7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
SCXQ7RTU7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SCXQ7RTU7 UNC93B4-201ENST00000505679 747 ntBASIC13.01□□□□□ -0.33
SCXQ7RTU7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SCXQ7RTU7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC13.01□□□□□ -0.33
SCXQ7RTU7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SCXQ7RTU7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SCXQ7RTU7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SCXQ7RTU7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
SCXQ7RTU7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SCXQ7RTU7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SCXQ7RTU7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SCXQ7RTU7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
SCXQ7RTU7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC13.01□□□□□ -0.33
SCXQ7RTU7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SCXQ7RTU7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SCXQ7RTU7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
SCXQ7RTU7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SCXQ7RTU7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SCXQ7RTU7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SCXQ7RTU7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SCXQ7RTU7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SCXQ7RTU7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SCXQ7RTU7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SCXQ7RTU7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC13□□□□□ -0.33
SCXQ7RTU7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SCXQ7RTU7 AFG3L1P-217ENST00000557444 2447 ntBASIC13□□□□□ -0.33
SCXQ7RTU7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SCXQ7RTU7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC13□□□□□ -0.33
SCXQ7RTU7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC13□□□□□ -0.33
SCXQ7RTU7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC13□□□□□ -0.33
SCXQ7RTU7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC13□□□□□ -0.33
SCXQ7RTU7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13□□□□□ -0.33
SCXQ7RTU7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC13□□□□□ -0.33
SCXQ7RTU7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SCXQ7RTU7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC13□□□□□ -0.33
SCXQ7RTU7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SCXQ7RTU7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
SCXQ7RTU7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SCXQ7RTU7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC13□□□□□ -0.33
SCXQ7RTU7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SCXQ7RTU7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SCXQ7RTU7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SCXQ7RTU7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13□□□□□ -0.33
SCXQ7RTU7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC13□□□□□ -0.33
SCXQ7RTU7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SCXQ7RTU7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13□□□□□ -0.33
SCXQ7RTU7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC13□□□□□ -0.33
SCXQ7RTU7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC13□□□□□ -0.33
SCXQ7RTU7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13□□□□□ -0.33
SCXQ7RTU7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC13□□□□□ -0.33
SCXQ7RTU7 AC008403.3-201ENST00000598924 454 ntBASIC13□□□□□ -0.33
SCXQ7RTU7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SCXQ7RTU7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13□□□□□ -0.33
SCXQ7RTU7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SCXQ7RTU7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC13□□□□□ -0.33
SCXQ7RTU7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SCXQ7RTU7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SCXQ7RTU7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC13□□□□□ -0.33
SCXQ7RTU7 Z98882.1-201ENST00000622160 2253 ntBASIC13□□□□□ -0.33
SCXQ7RTU7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
SCXQ7RTU7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC13□□□□□ -0.33
SCXQ7RTU7 FEM1AP4-201ENST00000443167 1987 ntBASIC13□□□□□ -0.33
SCXQ7RTU7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SCXQ7RTU7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SCXQ7RTU7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SCXQ7RTU7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC12.99□□□□□ -0.33
SCXQ7RTU7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SCXQ7RTU7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC12.99□□□□□ -0.33
SCXQ7RTU7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SCXQ7RTU7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SCXQ7RTU7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC12.99□□□□□ -0.33
SCXQ7RTU7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC12.99□□□□□ -0.33
SCXQ7RTU7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
SCXQ7RTU7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC12.99□□□□□ -0.33
SCXQ7RTU7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
SCXQ7RTU7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SCXQ7RTU7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SCXQ7RTU7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC12.99□□□□□ -0.33
SCXQ7RTU7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SCXQ7RTU7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
SCXQ7RTU7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SCXQ7RTU7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC12.99□□□□□ -0.33
SCXQ7RTU7 OR2A1-AS1-207ENST00000486094 819 ntBASIC12.99□□□□□ -0.33
SCXQ7RTU7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms