Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RUNDC3AQ59EK9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RUNDC3AQ59EK9 AC093503.3-201ENST00000624917 2352 ntBASIC18.64■□□□□ 0.58
RUNDC3AQ59EK9 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
RUNDC3AQ59EK9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 HLA-G-202ENST00000376815 851 ntBASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 HLA-G-203ENST00000376818 1127 ntBASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 KRT18P11-201ENST00000435214 1283 ntBASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 MFSD11-216ENST00000590393 1141 ntBASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.64■□□□□ 0.57
RUNDC3AQ59EK9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 AC068338.2-201ENST00000563278 1430 ntBASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 PHGDH-210ENST00000641115 1638 ntBASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.63■□□□□ 0.57
RUNDC3AQ59EK9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.62■□□□□ 0.57
RUNDC3AQ59EK9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RUNDC3AQ59EK9 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RUNDC3AQ59EK9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RUNDC3AQ59EK9 LINC01465-201ENST00000408887 1940 ntBASIC18.61■□□□□ 0.57
RUNDC3AQ59EK9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.61■□□□□ 0.57
RUNDC3AQ59EK9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
RUNDC3AQ59EK9 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms