Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RSPO4Q2I0M5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RSPO4Q2I0M5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RSPO4Q2I0M5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RSPO4Q2I0M5 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RSPO4Q2I0M5 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RSPO4Q2I0M5 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RSPO4Q2I0M5 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RSPO4Q2I0M5 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RSPO4Q2I0M5 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.21■□□□□ 0.67
RSPO4Q2I0M5 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.21■□□□□ 0.67
RSPO4Q2I0M5 AC112907.2-201ENST00000448639 330 ntBASIC19.21■□□□□ 0.67
RSPO4Q2I0M5 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RSPO4Q2I0M5 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.21■□□□□ 0.67
RSPO4Q2I0M5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.21■□□□□ 0.67
RSPO4Q2I0M5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RSPO4Q2I0M5 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.21■□□□□ 0.67
RSPO4Q2I0M5 NPAP1P7-201ENST00000613027 823 ntBASIC19.21■□□□□ 0.67
RSPO4Q2I0M5 AC011298.2-201ENST00000617989 482 ntBASIC19.21■□□□□ 0.67
RSPO4Q2I0M5 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RSPO4Q2I0M5 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RSPO4Q2I0M5 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RSPO4Q2I0M5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RSPO4Q2I0M5 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
RSPO4Q2I0M5 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RSPO4Q2I0M5 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RSPO4Q2I0M5 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.2■□□□□ 0.66
RSPO4Q2I0M5 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO4Q2I0M5 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO4Q2I0M5 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO4Q2I0M5 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO4Q2I0M5 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO4Q2I0M5 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO4Q2I0M5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO4Q2I0M5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO4Q2I0M5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO4Q2I0M5 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO4Q2I0M5 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO4Q2I0M5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO4Q2I0M5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO4Q2I0M5 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.2■□□□□ 0.66
RSPO4Q2I0M5 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.2■□□□□ 0.66
RSPO4Q2I0M5 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.2■□□□□ 0.66
RSPO4Q2I0M5 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO4Q2I0M5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
RSPO4Q2I0M5 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RSPO4Q2I0M5 AC092329.2-201ENST00000598402 547 ntBASIC19.2■□□□□ 0.66
RSPO4Q2I0M5 AC083849.1-201ENST00000615227 514 ntBASIC19.2■□□□□ 0.66
RSPO4Q2I0M5 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO4Q2I0M5 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO4Q2I0M5 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO4Q2I0M5 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO4Q2I0M5 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO4Q2I0M5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.19■□□□□ 0.66
RSPO4Q2I0M5 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.19■□□□□ 0.66
RSPO4Q2I0M5 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RSPO4Q2I0M5 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO4Q2I0M5 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO4Q2I0M5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO4Q2I0M5 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO4Q2I0M5 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO4Q2I0M5 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO4Q2I0M5 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO4Q2I0M5 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.19■□□□□ 0.66
RSPO4Q2I0M5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.19■□□□□ 0.66
RSPO4Q2I0M5 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
RSPO4Q2I0M5 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.19■□□□□ 0.66
RSPO4Q2I0M5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RSPO4Q2I0M5 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO4Q2I0M5 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.19■□□□□ 0.66
RSPO4Q2I0M5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RSPO4Q2I0M5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.19■□□□□ 0.66
RSPO4Q2I0M5 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO4Q2I0M5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO4Q2I0M5 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RSPO4Q2I0M5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO4Q2I0M5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO4Q2I0M5 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.18■□□□□ 0.66
RSPO4Q2I0M5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO4Q2I0M5 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO4Q2I0M5 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RSPO4Q2I0M5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
RSPO4Q2I0M5 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.18■□□□□ 0.66
RSPO4Q2I0M5 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.18■□□□□ 0.66
RSPO4Q2I0M5 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.18■□□□□ 0.66
RSPO4Q2I0M5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RSPO4Q2I0M5 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO4Q2I0M5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO4Q2I0M5 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.18■□□□□ 0.66
RSPO4Q2I0M5 RCC2P6-201ENST00000526625 1557 ntBASIC19.18■□□□□ 0.66
RSPO4Q2I0M5 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RSPO4Q2I0M5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO4Q2I0M5 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RSPO4Q2I0M5 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO4Q2I0M5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO4Q2I0M5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.18■□□□□ 0.66
RSPO4Q2I0M5 AC096733.2-201ENST00000609937 1394 ntBASIC19.18■□□□□ 0.66
RSPO4Q2I0M5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RSPO4Q2I0M5 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.17■□□□□ 0.66
RSPO4Q2I0M5 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms