Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.1■□□□□ 0.65
SLC6A12P48065 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.1■□□□□ 0.65
SLC6A12P48065 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.1■□□□□ 0.65
SLC6A12P48065 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.1■□□□□ 0.65
SLC6A12P48065 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A12P48065 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC6A12P48065 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC6A12P48065 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A12P48065 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SLC6A12P48065 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A12P48065 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A12P48065 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A12P48065 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A12P48065 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A12P48065 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A12P48065 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A12P48065 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC6A12P48065 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A12P48065 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A12P48065 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SLC6A12P48065 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.09■□□□□ 0.65
SLC6A12P48065 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.09■□□□□ 0.65
SLC6A12P48065 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
SLC6A12P48065 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC6A12P48065 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.09■□□□□ 0.65
SLC6A12P48065 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A12P48065 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A12P48065 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A12P48065 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A12P48065 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A12P48065 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC6A12P48065 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC6A12P48065 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A12P48065 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SLC6A12P48065 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC6A12P48065 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.08■□□□□ 0.65
SLC6A12P48065 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC6A12P48065 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC6A12P48065 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC6A12P48065 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC6A12P48065 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SLC6A12P48065 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC6A12P48065 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
SLC6A12P48065 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC6A12P48065 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC6A12P48065 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC6A12P48065 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.08■□□□□ 0.64
SLC6A12P48065 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC6A12P48065 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC6A12P48065 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.08■□□□□ 0.64
SLC6A12P48065 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC6A12P48065 SOX15-203ENST00000570788 1093 ntBASIC19.08■□□□□ 0.64
SLC6A12P48065 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
SLC6A12P48065 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC6A12P48065 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
SLC6A12P48065 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC6A12P48065 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC6A12P48065 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.08■□□□□ 0.64
SLC6A12P48065 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
SLC6A12P48065 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC6A12P48065 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC6A12P48065 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A12P48065 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A12P48065 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A12P48065 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A12P48065 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SLC6A12P48065 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SLC6A12P48065 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A12P48065 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC6A12P48065 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.07■□□□□ 0.64
SLC6A12P48065 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.07■□□□□ 0.64
SLC6A12P48065 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC6A12P48065 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.07■□□□□ 0.64
SLC6A12P48065 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SLC6A12P48065 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.07■□□□□ 0.64
SLC6A12P48065 AC120498.8-201ENST00000614275 531 ntBASIC19.07■□□□□ 0.64
SLC6A12P48065 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.07■□□□□ 0.64
SLC6A12P48065 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SLC6A12P48065 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.07■□□□□ 0.64
SLC6A12P48065 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A12P48065 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A12P48065 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC6A12P48065 AC116562.4-201ENST00000641316 2276 ntBASIC19.07■□□□□ 0.64
SLC6A12P48065 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SLC6A12P48065 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.06■□□□□ 0.64
SLC6A12P48065 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC6A12P48065 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
SLC6A12P48065 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
SLC6A12P48065 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SLC6A12P48065 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SLC6A12P48065 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC6A12P48065 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SLC6A12P48065 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC6A12P48065 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC6A12P48065 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.06■□□□□ 0.64
SLC6A12P48065 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SLC6A12P48065 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.06■□□□□ 0.64
SLC6A12P48065 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.06■□□□□ 0.64
SLC6A12P48065 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.06■□□□□ 0.64
SLC6A12P48065 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms