Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL8A2P25067 HTR7P1-201ENST00000538670 1336 ntBASIC16.7■□□□□ 0.26
COL8A2P25067 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL8A2P25067 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL8A2P25067 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL8A2P25067 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
COL8A2P25067 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.7■□□□□ 0.26
COL8A2P25067 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL8A2P25067 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL8A2P25067 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.7■□□□□ 0.26
COL8A2P25067 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL8A2P25067 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL8A2P25067 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL8A2P25067 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.7■□□□□ 0.26
COL8A2P25067 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.7■□□□□ 0.26
COL8A2P25067 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.7■□□□□ 0.26
COL8A2P25067 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.7■□□□□ 0.26
COL8A2P25067 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
COL8A2P25067 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL8A2P25067 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
COL8A2P25067 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
COL8A2P25067 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
COL8A2P25067 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL8A2P25067 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL8A2P25067 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL8A2P25067 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.7■□□□□ 0.26
COL8A2P25067 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL8A2P25067 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.69■□□□□ 0.26
COL8A2P25067 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL8A2P25067 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL8A2P25067 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
COL8A2P25067 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.69■□□□□ 0.26
COL8A2P25067 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
COL8A2P25067 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL8A2P25067 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL8A2P25067 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL8A2P25067 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
COL8A2P25067 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL8A2P25067 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.69■□□□□ 0.26
COL8A2P25067 AC004264.1-201ENST00000608354 794 ntBASIC16.69■□□□□ 0.26
COL8A2P25067 AC113410.3-201ENST00000623366 203 ntBASIC16.69■□□□□ 0.26
COL8A2P25067 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.69■□□□□ 0.26
COL8A2P25067 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL8A2P25067 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL8A2P25067 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL8A2P25067 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL8A2P25067 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL8A2P25067 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL8A2P25067 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL8A2P25067 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL8A2P25067 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL8A2P25067 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL8A2P25067 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL8A2P25067 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
COL8A2P25067 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL8A2P25067 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL8A2P25067 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL8A2P25067 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL8A2P25067 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL8A2P25067 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.68■□□□□ 0.26
COL8A2P25067 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL8A2P25067 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.68■□□□□ 0.26
COL8A2P25067 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL8A2P25067 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
COL8A2P25067 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL8A2P25067 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
COL8A2P25067 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.68■□□□□ 0.26
COL8A2P25067 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL8A2P25067 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.68■□□□□ 0.26
COL8A2P25067 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COL8A2P25067 AC020907.5-201ENST00000624372 1936 ntBASIC16.67■□□□□ 0.26
COL8A2P25067 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.67■□□□□ 0.26
COL8A2P25067 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.67■□□□□ 0.26
COL8A2P25067 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL8A2P25067 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
COL8A2P25067 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COL8A2P25067 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.67■□□□□ 0.26
COL8A2P25067 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.67■□□□□ 0.26
COL8A2P25067 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.67■□□□□ 0.26
COL8A2P25067 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.67■□□□□ 0.26
COL8A2P25067 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.67■□□□□ 0.26
COL8A2P25067 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
COL8A2P25067 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
COL8A2P25067 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.67■□□□□ 0.26
COL8A2P25067 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
COL8A2P25067 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL8A2P25067 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
COL8A2P25067 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL8A2P25067 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL8A2P25067 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL8A2P25067 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.67■□□□□ 0.26
COL8A2P25067 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.67■□□□□ 0.26
COL8A2P25067 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL8A2P25067 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL8A2P25067 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL8A2P25067 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL8A2P25067 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
COL8A2P25067 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL8A2P25067 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL8A2P25067 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms