Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.93■□□□□ 0.78
XPAP23025 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.93■□□□□ 0.78
XPAP23025 AC133681.1-201ENST00000465482 601 ntBASIC19.93■□□□□ 0.78
XPAP23025 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.93■□□□□ 0.78
XPAP23025 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
XPAP23025 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
XPAP23025 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.93■□□□□ 0.78
XPAP23025 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
XPAP23025 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
XPAP23025 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.93■□□□□ 0.78
XPAP23025 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
XPAP23025 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
XPAP23025 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
XPAP23025 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
XPAP23025 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.92■□□□□ 0.78
XPAP23025 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
XPAP23025 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.92■□□□□ 0.78
XPAP23025 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.92■□□□□ 0.78
XPAP23025 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
XPAP23025 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
XPAP23025 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
XPAP23025 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
XPAP23025 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
XPAP23025 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.92■□□□□ 0.78
XPAP23025 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
XPAP23025 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
XPAP23025 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
XPAP23025 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
XPAP23025 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.92■□□□□ 0.78
XPAP23025 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
XPAP23025 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.92■□□□□ 0.78
XPAP23025 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
XPAP23025 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.92■□□□□ 0.78
XPAP23025 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.92■□□□□ 0.78
XPAP23025 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
XPAP23025 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
XPAP23025 GABARAPL3-202ENST00000624044 1851 ntBASIC19.92■□□□□ 0.78
XPAP23025 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.92■□□□□ 0.78
XPAP23025 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
XPAP23025 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
XPAP23025 NBPF21P-201ENST00000425093 1451 ntBASIC19.92■□□□□ 0.78
XPAP23025 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
XPAP23025 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
XPAP23025 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
XPAP23025 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.91■□□□□ 0.78
XPAP23025 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
XPAP23025 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
XPAP23025 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
XPAP23025 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.91■□□□□ 0.78
XPAP23025 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
XPAP23025 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
XPAP23025 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
XPAP23025 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
XPAP23025 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
XPAP23025 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
XPAP23025 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.91■□□□□ 0.78
XPAP23025 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
XPAP23025 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.91■□□□□ 0.78
XPAP23025 AC004264.1-201ENST00000608354 794 ntBASIC19.91■□□□□ 0.78
XPAP23025 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
XPAP23025 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
XPAP23025 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
XPAP23025 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
XPAP23025 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
XPAP23025 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.91■□□□□ 0.78
XPAP23025 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
XPAP23025 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
XPAP23025 BX119927.1-201ENST00000636596 1552 ntBASIC19.91■□□□□ 0.78
XPAP23025 PHGDH-210ENST00000641115 1638 ntBASIC19.91■□□□□ 0.78
XPAP23025 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
XPAP23025 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
XPAP23025 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
XPAP23025 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
XPAP23025 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
XPAP23025 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
XPAP23025 MIR718-201ENST00000390190 70 ntBASIC19.9■□□□□ 0.78
XPAP23025 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
XPAP23025 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.9■□□□□ 0.78
XPAP23025 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.9■□□□□ 0.78
XPAP23025 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.9■□□□□ 0.78
XPAP23025 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.9■□□□□ 0.78
XPAP23025 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
XPAP23025 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
XPAP23025 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
XPAP23025 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
XPAP23025 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
XPAP23025 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
XPAP23025 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
XPAP23025 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
XPAP23025 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.9■□□□□ 0.78
XPAP23025 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
XPAP23025 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
XPAP23025 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
XPAP23025 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
XPAP23025 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
XPAP23025 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
XPAP23025 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
XPAP23025 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
XPAP23025 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
XPAP23025 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms