Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH1P12830 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH1P12830 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH1P12830 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH1P12830 AL020996.1-203ENST00000536896 2307 ntBASIC19.24■□□□□ 0.67
CDH1P12830 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH1P12830 KRT16P6-202ENST00000425692 1426 ntBASIC19.24■□□□□ 0.67
CDH1P12830 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CDH1P12830 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
CDH1P12830 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH1P12830 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH1P12830 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH1P12830 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH1P12830 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.23■□□□□ 0.67
CDH1P12830 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH1P12830 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CDH1P12830 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.23■□□□□ 0.67
CDH1P12830 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDH1P12830 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH1P12830 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH1P12830 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH1P12830 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH1P12830 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH1P12830 AL390719.1-204ENST00000412397 1219 ntBASIC19.23■□□□□ 0.67
CDH1P12830 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH1P12830 AC005829.2-201ENST00000571422 1056 ntBASIC19.23■□□□□ 0.67
CDH1P12830 AC060766.5-201ENST00000590539 871 ntBASIC19.23■□□□□ 0.67
CDH1P12830 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH1P12830 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH1P12830 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CDH1P12830 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH1P12830 AL691432.2-201ENST00000607222 2038 ntBASIC19.23■□□□□ 0.67
CDH1P12830 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH1P12830 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH1P12830 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH1P12830 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CDH1P12830 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH1P12830 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH1P12830 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH1P12830 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH1P12830 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.22■□□□□ 0.67
CDH1P12830 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH1P12830 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH1P12830 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH1P12830 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH1P12830 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH1P12830 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH1P12830 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH1P12830 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH1P12830 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH1P12830 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH1P12830 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH1P12830 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.22■□□□□ 0.67
CDH1P12830 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH1P12830 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.22■□□□□ 0.67
CDH1P12830 AC006557.6-201ENST00000623071 864 ntBASIC19.22■□□□□ 0.67
CDH1P12830 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH1P12830 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.22■□□□□ 0.67
CDH1P12830 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH1P12830 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
CDH1P12830 AC116562.4-201ENST00000641316 2276 ntBASIC19.22■□□□□ 0.67
CDH1P12830 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH1P12830 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH1P12830 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH1P12830 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH1P12830 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH1P12830 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.21■□□□□ 0.67
CDH1P12830 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH1P12830 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH1P12830 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH1P12830 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH1P12830 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH1P12830 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CDH1P12830 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH1P12830 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH1P12830 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH1P12830 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.21■□□□□ 0.67
CDH1P12830 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH1P12830 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH1P12830 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH1P12830 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH1P12830 PNMA6B-201ENST00000538162 1200 ntBASIC19.21■□□□□ 0.67
CDH1P12830 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH1P12830 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH1P12830 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CDH1P12830 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH1P12830 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH1P12830 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH1P12830 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH1P12830 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CDH1P12830 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH1P12830 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.21■□□□□ 0.67
CDH1P12830 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH1P12830 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.21■□□□□ 0.67
CDH1P12830 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.21■□□□□ 0.67
CDH1P12830 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH1P12830 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH1P12830 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.66
CDH1P12830 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH1P12830 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms