Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.08■□□□□ 0.97
FAM228BP0C875 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.08■□□□□ 0.97
FAM228BP0C875 AC005181.1-201ENST00000604782 1256 ntBASIC21.08■□□□□ 0.97
FAM228BP0C875 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
FAM228BP0C875 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
FAM228BP0C875 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.08■□□□□ 0.96
FAM228BP0C875 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
FAM228BP0C875 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FAM228BP0C875 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
FAM228BP0C875 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
FAM228BP0C875 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
FAM228BP0C875 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FAM228BP0C875 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.07■□□□□ 0.96
FAM228BP0C875 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.07■□□□□ 0.96
FAM228BP0C875 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.07■□□□□ 0.96
FAM228BP0C875 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FAM228BP0C875 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.07■□□□□ 0.96
FAM228BP0C875 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
FAM228BP0C875 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
FAM228BP0C875 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.07■□□□□ 0.96
FAM228BP0C875 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FAM228BP0C875 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FAM228BP0C875 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.07■□□□□ 0.96
FAM228BP0C875 AC004408.2-201ENST00000623613 2777 ntBASIC21.07■□□□□ 0.96
FAM228BP0C875 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FAM228BP0C875 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FAM228BP0C875 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FAM228BP0C875 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.06■□□□□ 0.96
FAM228BP0C875 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
FAM228BP0C875 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FAM228BP0C875 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
FAM228BP0C875 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.06■□□□□ 0.96
FAM228BP0C875 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
FAM228BP0C875 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FAM228BP0C875 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FAM228BP0C875 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.06■□□□□ 0.96
FAM228BP0C875 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.06■□□□□ 0.96
FAM228BP0C875 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FAM228BP0C875 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
FAM228BP0C875 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.06■□□□□ 0.96
FAM228BP0C875 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
FAM228BP0C875 MIR5787-201ENST00000611784 55 ntBASIC21.06■□□□□ 0.96
FAM228BP0C875 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
FAM228BP0C875 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FAM228BP0C875 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
FAM228BP0C875 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FAM228BP0C875 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
FAM228BP0C875 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FAM228BP0C875 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.06■□□□□ 0.96
FAM228BP0C875 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FAM228BP0C875 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
FAM228BP0C875 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FAM228BP0C875 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.05■□□□□ 0.96
FAM228BP0C875 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FAM228BP0C875 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FAM228BP0C875 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FAM228BP0C875 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
FAM228BP0C875 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.05■□□□□ 0.96
FAM228BP0C875 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
FAM228BP0C875 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FAM228BP0C875 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
FAM228BP0C875 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FAM228BP0C875 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
FAM228BP0C875 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
FAM228BP0C875 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FAM228BP0C875 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FAM228BP0C875 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FAM228BP0C875 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
FAM228BP0C875 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.05■□□□□ 0.96
FAM228BP0C875 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FAM228BP0C875 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FAM228BP0C875 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
FAM228BP0C875 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
FAM228BP0C875 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FAM228BP0C875 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FAM228BP0C875 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.04■□□□□ 0.96
FAM228BP0C875 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
FAM228BP0C875 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FAM228BP0C875 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.04■□□□□ 0.96
FAM228BP0C875 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FAM228BP0C875 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
FAM228BP0C875 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FAM228BP0C875 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FAM228BP0C875 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FAM228BP0C875 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.04■□□□□ 0.96
FAM228BP0C875 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FAM228BP0C875 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FAM228BP0C875 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
FAM228BP0C875 AC092437.1-201ENST00000624794 1048 ntBASIC21.04■□□□□ 0.96
FAM228BP0C875 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.04■□□□□ 0.96
FAM228BP0C875 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FAM228BP0C875 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
FAM228BP0C875 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.04■□□□□ 0.96
FAM228BP0C875 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.04■□□□□ 0.96
FAM228BP0C875 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FAM228BP0C875 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FAM228BP0C875 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.04■□□□□ 0.96
FAM228BP0C875 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FAM228BP0C875 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
FAM228BP0C875 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms