Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ABCA1O95477 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ABCA1O95477 DUX4L26-201ENST00000489078 1255 ntBASIC16.54■□□□□ 0.24
ABCA1O95477 AP002982.1-201ENST00000492365 877 ntBASIC16.54■□□□□ 0.24
ABCA1O95477 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.54■□□□□ 0.24
ABCA1O95477 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
ABCA1O95477 FITM1-202ENST00000559294 800 ntBASIC16.54■□□□□ 0.24
ABCA1O95477 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
ABCA1O95477 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.54■□□□□ 0.24
ABCA1O95477 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ABCA1O95477 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ABCA1O95477 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
ABCA1O95477 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ABCA1O95477 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ABCA1O95477 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ABCA1O95477 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ABCA1O95477 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.54■□□□□ 0.24
ABCA1O95477 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.54■□□□□ 0.24
ABCA1O95477 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.53■□□□□ 0.24
ABCA1O95477 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ABCA1O95477 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ABCA1O95477 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ABCA1O95477 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.53■□□□□ 0.24
ABCA1O95477 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.53■□□□□ 0.24
ABCA1O95477 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.53■□□□□ 0.24
ABCA1O95477 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.53■□□□□ 0.24
ABCA1O95477 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ABCA1O95477 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ABCA1O95477 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
ABCA1O95477 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.53■□□□□ 0.24
ABCA1O95477 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ABCA1O95477 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ABCA1O95477 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ABCA1O95477 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ABCA1O95477 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ABCA1O95477 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.53■□□□□ 0.24
ABCA1O95477 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.53■□□□□ 0.24
ABCA1O95477 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.53■□□□□ 0.24
ABCA1O95477 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ABCA1O95477 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ABCA1O95477 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ABCA1O95477 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ABCA1O95477 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ABCA1O95477 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.52■□□□□ 0.24
ABCA1O95477 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ABCA1O95477 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.52■□□□□ 0.24
ABCA1O95477 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ABCA1O95477 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ABCA1O95477 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ABCA1O95477 MIR1238-201ENST00000408483 83 ntBASIC16.52■□□□□ 0.24
ABCA1O95477 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.52■□□□□ 0.24
ABCA1O95477 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.52■□□□□ 0.24
ABCA1O95477 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.52■□□□□ 0.24
ABCA1O95477 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ABCA1O95477 PTBP1P-201ENST00000554374 1601 ntBASIC16.52■□□□□ 0.24
ABCA1O95477 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ABCA1O95477 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ABCA1O95477 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ABCA1O95477 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ABCA1O95477 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.52■□□□□ 0.23
ABCA1O95477 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.52■□□□□ 0.23
ABCA1O95477 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ABCA1O95477 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ABCA1O95477 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ABCA1O95477 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.52■□□□□ 0.23
ABCA1O95477 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
ABCA1O95477 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ABCA1O95477 KSR1P1-201ENST00000446298 240 ntBASIC16.52■□□□□ 0.23
ABCA1O95477 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.52■□□□□ 0.23
ABCA1O95477 WWOX-216ENST00000569818 525 ntBASIC16.52■□□□□ 0.23
ABCA1O95477 AL391422.3-201ENST00000603791 2761 ntBASIC16.52■□□□□ 0.23
ABCA1O95477 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ABCA1O95477 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
ABCA1O95477 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ABCA1O95477 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ABCA1O95477 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ABCA1O95477 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.51■□□□□ 0.23
ABCA1O95477 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ABCA1O95477 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ABCA1O95477 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ABCA1O95477 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ABCA1O95477 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ABCA1O95477 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ABCA1O95477 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.51■□□□□ 0.23
ABCA1O95477 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.51■□□□□ 0.23
ABCA1O95477 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.51■□□□□ 0.23
ABCA1O95477 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ABCA1O95477 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ABCA1O95477 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ABCA1O95477 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ABCA1O95477 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ABCA1O95477 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ABCA1O95477 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ABCA1O95477 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ABCA1O95477 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ABCA1O95477 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.51■□□□□ 0.23
ABCA1O95477 NIFKP9-201ENST00000419265 221 ntBASIC16.5■□□□□ 0.23
ABCA1O95477 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ABCA1O95477 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ABCA1O95477 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms