Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
PFDN1O60925 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PFDN1O60925 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PFDN1O60925 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
PFDN1O60925 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.73■□□□□ 0.43
PFDN1O60925 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PFDN1O60925 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PFDN1O60925 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PFDN1O60925 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PFDN1O60925 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.73■□□□□ 0.43
PFDN1O60925 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.73■□□□□ 0.43
PFDN1O60925 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PFDN1O60925 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.73■□□□□ 0.43
PFDN1O60925 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PFDN1O60925 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
PFDN1O60925 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PFDN1O60925 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
PFDN1O60925 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
PFDN1O60925 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PFDN1O60925 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PFDN1O60925 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PFDN1O60925 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PFDN1O60925 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PFDN1O60925 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PFDN1O60925 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PFDN1O60925 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PFDN1O60925 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PFDN1O60925 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PFDN1O60925 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PFDN1O60925 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PFDN1O60925 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PFDN1O60925 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PFDN1O60925 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PFDN1O60925 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
PFDN1O60925 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.72■□□□□ 0.43
PFDN1O60925 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PFDN1O60925 SMPD5-203ENST00000639008 1464 ntBASIC17.72■□□□□ 0.43
PFDN1O60925 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PFDN1O60925 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PFDN1O60925 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PFDN1O60925 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PFDN1O60925 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PFDN1O60925 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PFDN1O60925 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PFDN1O60925 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PFDN1O60925 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PFDN1O60925 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PFDN1O60925 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PFDN1O60925 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PFDN1O60925 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PFDN1O60925 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.71■□□□□ 0.43
PFDN1O60925 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.71■□□□□ 0.43
PFDN1O60925 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.71■□□□□ 0.43
PFDN1O60925 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PFDN1O60925 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
PFDN1O60925 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PFDN1O60925 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.71■□□□□ 0.43
PFDN1O60925 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PFDN1O60925 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PFDN1O60925 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PFDN1O60925 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PFDN1O60925 AL157400.5-201ENST00000507624 621 ntBASIC17.71■□□□□ 0.43
PFDN1O60925 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.71■□□□□ 0.43
PFDN1O60925 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PFDN1O60925 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PFDN1O60925 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
PFDN1O60925 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.71■□□□□ 0.42
PFDN1O60925 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PFDN1O60925 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PFDN1O60925 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PFDN1O60925 MST1L-201ENST00000442552 2185 ntBASIC17.7■□□□□ 0.42
PFDN1O60925 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PFDN1O60925 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PFDN1O60925 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PFDN1O60925 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PFDN1O60925 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.7■□□□□ 0.42
PFDN1O60925 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.7■□□□□ 0.42
PFDN1O60925 SIRPAP1-201ENST00000448467 1770 ntBASIC17.7■□□□□ 0.42
PFDN1O60925 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PFDN1O60925 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PFDN1O60925 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PFDN1O60925 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PFDN1O60925 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PFDN1O60925 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.7■□□□□ 0.42
PFDN1O60925 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PFDN1O60925 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN1O60925 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.69■□□□□ 0.42
PFDN1O60925 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PFDN1O60925 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN1O60925 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN1O60925 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN1O60925 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN1O60925 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN1O60925 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN1O60925 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN1O60925 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.69■□□□□ 0.42
PFDN1O60925 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.69■□□□□ 0.42
PFDN1O60925 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.69■□□□□ 0.42
PFDN1O60925 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN1O60925 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms