Protein–RNA interactions for Protein: O14874

BCKDK, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDKO14874 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.7■□□□□ 0.58
BCKDKO14874 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BCKDKO14874 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.69■□□□□ 0.58
BCKDKO14874 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
BCKDKO14874 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BCKDKO14874 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCKDKO14874 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCKDKO14874 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.69■□□□□ 0.58
BCKDKO14874 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BCKDKO14874 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BCKDKO14874 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCKDKO14874 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCKDKO14874 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCKDKO14874 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BCKDKO14874 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BCKDKO14874 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.69■□□□□ 0.58
BCKDKO14874 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.69■□□□□ 0.58
BCKDKO14874 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.69■□□□□ 0.58
BCKDKO14874 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCKDKO14874 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.69■□□□□ 0.58
BCKDKO14874 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.69■□□□□ 0.58
BCKDKO14874 MIR4651-201ENST00000582622 73 ntBASIC18.69■□□□□ 0.58
BCKDKO14874 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.69■□□□□ 0.58
BCKDKO14874 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.69■□□□□ 0.58
BCKDKO14874 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCKDKO14874 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
BCKDKO14874 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCKDKO14874 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.69■□□□□ 0.58
BCKDKO14874 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCKDKO14874 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCKDKO14874 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCKDKO14874 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.69■□□□□ 0.58
BCKDKO14874 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BCKDKO14874 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BCKDKO14874 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.68■□□□□ 0.58
BCKDKO14874 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
BCKDKO14874 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BCKDKO14874 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BCKDKO14874 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
BCKDKO14874 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
BCKDKO14874 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
BCKDKO14874 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.68■□□□□ 0.58
BCKDKO14874 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BCKDKO14874 AC100791.3-201ENST00000617619 330 ntBASIC18.68■□□□□ 0.58
BCKDKO14874 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.68■□□□□ 0.58
BCKDKO14874 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BCKDKO14874 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BCKDKO14874 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.68■□□□□ 0.58
BCKDKO14874 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BCKDKO14874 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
BCKDKO14874 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BCKDKO14874 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BCKDKO14874 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BCKDKO14874 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BCKDKO14874 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
BCKDKO14874 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.68■□□□□ 0.58
BCKDKO14874 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BCKDKO14874 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
BCKDKO14874 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.67■□□□□ 0.58
BCKDKO14874 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BCKDKO14874 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BCKDKO14874 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BCKDKO14874 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BCKDKO14874 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
BCKDKO14874 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BCKDKO14874 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BCKDKO14874 LSM12P1-201ENST00000411836 588 ntBASIC18.67■□□□□ 0.58
BCKDKO14874 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
BCKDKO14874 AC091874.3-201ENST00000512672 1195 ntBASIC18.67■□□□□ 0.58
BCKDKO14874 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.67■□□□□ 0.58
BCKDKO14874 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BCKDKO14874 MYC-209ENST00000641252 345 ntBASIC18.67■□□□□ 0.58
BCKDKO14874 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BCKDKO14874 AC005332.7-201ENST00000614046 2005 ntBASIC18.67■□□□□ 0.58
BCKDKO14874 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BCKDKO14874 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
BCKDKO14874 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
BCKDKO14874 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
BCKDKO14874 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.67■□□□□ 0.58
BCKDKO14874 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BCKDKO14874 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BCKDKO14874 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.67■□□□□ 0.58
BCKDKO14874 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BCKDKO14874 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
BCKDKO14874 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BCKDKO14874 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
BCKDKO14874 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
BCKDKO14874 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BCKDKO14874 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BCKDKO14874 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.66■□□□□ 0.58
BCKDKO14874 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BCKDKO14874 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BCKDKO14874 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
BCKDKO14874 POU5F1P3-201ENST00000428824 1078 ntBASIC18.66■□□□□ 0.58
BCKDKO14874 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
BCKDKO14874 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.66■□□□□ 0.58
BCKDKO14874 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
BCKDKO14874 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
BCKDKO14874 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BCKDKO14874 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms