Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTCAO00442 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTCAO00442 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.85■□□□□ 0.61
RTCAO00442 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RTCAO00442 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.85■□□□□ 0.61
RTCAO00442 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTCAO00442 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RTCAO00442 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTCAO00442 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
RTCAO00442 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.85■□□□□ 0.61
RTCAO00442 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTCAO00442 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.85■□□□□ 0.61
RTCAO00442 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.85■□□□□ 0.61
RTCAO00442 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.85■□□□□ 0.61
RTCAO00442 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.85■□□□□ 0.61
RTCAO00442 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RTCAO00442 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTCAO00442 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTCAO00442 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RTCAO00442 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTCAO00442 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTCAO00442 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTCAO00442 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTCAO00442 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.84■□□□□ 0.61
RTCAO00442 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RTCAO00442 RPS2P52-201ENST00000469610 820 ntBASIC18.84■□□□□ 0.61
RTCAO00442 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.84■□□□□ 0.61
RTCAO00442 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.84■□□□□ 0.61
RTCAO00442 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.84■□□□□ 0.61
RTCAO00442 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTCAO00442 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTCAO00442 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTCAO00442 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.84■□□□□ 0.61
RTCAO00442 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RTCAO00442 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTCAO00442 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTCAO00442 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTCAO00442 AC018553.1-201ENST00000616682 1458 ntBASIC18.84■□□□□ 0.61
RTCAO00442 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTCAO00442 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTCAO00442 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTCAO00442 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.83■□□□□ 0.61
RTCAO00442 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTCAO00442 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RTCAO00442 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
RTCAO00442 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTCAO00442 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTCAO00442 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTCAO00442 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTCAO00442 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTCAO00442 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.83■□□□□ 0.6
RTCAO00442 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.83■□□□□ 0.6
RTCAO00442 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.83■□□□□ 0.6
RTCAO00442 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.83■□□□□ 0.6
RTCAO00442 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.83■□□□□ 0.6
RTCAO00442 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.83■□□□□ 0.6
RTCAO00442 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.83■□□□□ 0.6
RTCAO00442 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTCAO00442 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.83■□□□□ 0.6
RTCAO00442 AC009237.14-201ENST00000609975 1594 ntBASIC18.83■□□□□ 0.6
RTCAO00442 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTCAO00442 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.83■□□□□ 0.6
RTCAO00442 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTCAO00442 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.83■□□□□ 0.6
RTCAO00442 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
RTCAO00442 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTCAO00442 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTCAO00442 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTCAO00442 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTCAO00442 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTCAO00442 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTCAO00442 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTCAO00442 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTCAO00442 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RTCAO00442 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTCAO00442 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTCAO00442 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.82■□□□□ 0.6
RTCAO00442 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTCAO00442 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.82■□□□□ 0.6
RTCAO00442 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.82■□□□□ 0.6
RTCAO00442 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
RTCAO00442 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTCAO00442 KRT18P6-201ENST00000555540 1265 ntBASIC18.82■□□□□ 0.6
RTCAO00442 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RTCAO00442 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.82■□□□□ 0.6
RTCAO00442 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTCAO00442 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RTCAO00442 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.82■□□□□ 0.6
RTCAO00442 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTCAO00442 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTCAO00442 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTCAO00442 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.82■□□□□ 0.6
RTCAO00442 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.82■□□□□ 0.6
RTCAO00442 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTCAO00442 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.82■□□□□ 0.6
RTCAO00442 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTCAO00442 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RTCAO00442 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RTCAO00442 AP001271.2-201ENST00000624018 1556 ntBASIC18.81■□□□□ 0.6
RTCAO00442 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms