Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 WDR11-AS1-203ENST00000598981 2242 ntTSL 5 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 GSTM4-203ENST00000369833 3990 ntTSL 5 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 HM13-224ENST00000498035 3932 ntTSL 2 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 SAMMSON-203ENST00000641005 2168 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 XIRP2-206ENST00000409728 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 OR4N4-201ENST00000328795 1126 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 STAG3L4-201ENST00000352103 530 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 SNORD35A-201ENST00000363389 86 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 RNU6-618P-201ENST00000363518 112 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 RNU6-1227P-201ENST00000383981 107 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 RNU6-1042P-201ENST00000384204 107 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 SNORA2C-201ENST00000408564 137 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 LSM5-206ENST00000409987 504 ntTSL 5 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 RN7SKP268-201ENST00000411107 316 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AL390840.1-201ENST00000420303 988 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 GAPDHP19-201ENST00000431768 1005 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 COX6CP2-201ENST00000444980 225 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 PPIAP20-201ENST00000449839 135 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 PSMA6P2-201ENST00000457574 686 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 RN7SL221P-201ENST00000466190 281 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 RPL12P21-201ENST00000472214 518 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AC025459.1-201ENST00000504072 156 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 RNU6-327P-201ENST00000516270 127 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 RPL10P19-201ENST00000519013 301 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 SNX18P27-201ENST00000523611 779 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AP003080.1-202ENST00000526526 915 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 FAM92A1P1-201ENST00000528023 890 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 NDFIP1P1-201ENST00000543144 525 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AC087465.1-201ENST00000560574 245 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 MIR3154-201ENST00000577829 84 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 BPTFP1-201ENST00000579209 492 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 MIR4312-201ENST00000579909 76 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AL020997.3-201ENST00000602843 359 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AL360085.1-201ENST00000604713 532 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AC016877.3-201ENST00000606778 504 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AL138478.1-201ENST00000612252 832 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AC024940.5-201ENST00000622889 474 ntBASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AC135068.3-201ENST00000623441 1125 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 TRIM5-201ENST00000380027 2290 ntTSL 5 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AL590999.1-201ENST00000607675 3776 ntTSL 2 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 TCF4-207ENST00000540999 2572 ntTSL 2 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 CDH18-203ENST00000502796 2386 ntTSL 2 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 SORCS1-202ENST00000344440 3009 ntTSL 5 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC7.32□□□□□ -1.24
RSPO4Q2I0M5 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.31□□□□□ -1.24
RSPO4Q2I0M5 APEX2-201ENST00000374987 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RSPO4Q2I0M5 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
RSPO4Q2I0M5 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
RSPO4Q2I0M5 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
RSPO4Q2I0M5 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC7.31□□□□□ -1.24
RSPO4Q2I0M5 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RSPO4Q2I0M5 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
RSPO4Q2I0M5 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RSPO4Q2I0M5 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC7.31□□□□□ -1.24
RSPO4Q2I0M5 ODF3-202ENST00000342593 386 ntTSL 5 BASIC7.31□□□□□ -1.24
RSPO4Q2I0M5 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RSPO4Q2I0M5 DNAJA1P3-201ENST00000399417 1194 ntBASIC7.31□□□□□ -1.24
RSPO4Q2I0M5 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms